RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 SH2D4AQ9H788 454 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 ORC3Q9UBD5 711 aaPredicted RBP12.1□□□□□ -0.47
TRPS1-201ENST00000220888 HEATR3Q7Z4Q2 680 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 TMTC2Q8N394 836 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 RBM17Q96I25 401 aaKnown RBP12.1□□□□□ -0.47
TRPS1-201ENST00000220888 PLVAPQ9BX97 442 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 TMOD4Q9NZQ9 345 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 SPECC1Q5M775 1068 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 CPLX3Q8WVH0 158 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 UBXN4Q92575 508 aa12.1□□□□□ -0.47
TRPS1-201ENST00000220888 JARID2Q92833 1246 aaPredicted RBP12.1□□□□□ -0.47
TRPS1-201ENST00000220888 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
TRPS1-201ENST00000220888 CAMSAP2Q08AD1 1489 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 ZFYP08048 801 aaPredicted RBP12.09□□□□□ -0.47
TRPS1-201ENST00000220888 MAP9Q49MG5 647 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 SREK1Q8WXA9 508 aaKnown RBP12.09□□□□□ -0.47
TRPS1-201ENST00000220888 FAM212AQ96EL1 285 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 CALM1P0DP23 149 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 CALM2P0DP24 149 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 CALM3P0DP25 149 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 KANK3Q6NY19 840 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 NAA15Q9BXJ9 866 aaKnown RBP12.09□□□□□ -0.47
TRPS1-201ENST00000220888 BACH1O14867 736 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 CTAGE5O15320 804 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 ANKRD2Q9GZV1 360 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 CNNM2Q9H8M5 875 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 DPH6Q7L8W6 267 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 RAB3IL1Q8TBN0 382 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 EFCAB5A4FU69 1503 aa12.09□□□□□ -0.47
TRPS1-201ENST00000220888 NAPAP54920 295 aa12.08□□□□□ -0.47
TRPS1-201ENST00000220888 PPP1R14CQ8TAE6 165 aa12.08□□□□□ -0.47
TRPS1-201ENST00000220888 NDC80O14777 642 aa12.08□□□□□ -0.48
TRPS1-201ENST00000220888 ZBTB24O43167 697 aaPredicted RBP12.08□□□□□ -0.48
TRPS1-201ENST00000220888 MCM3P25205 808 aa12.08□□□□□ -0.48
TRPS1-201ENST00000220888 CEP63Q96MT8 703 aa12.08□□□□□ -0.48
TRPS1-201ENST00000220888 LIMCH1Q9UPQ0 1083 aa12.08□□□□□ -0.48
TRPS1-201ENST00000220888 MCM5P33992 734 aa12.08□□□□□ -0.48
TRPS1-201ENST00000220888 FSIP1Q8NA03 581 aa12.08□□□□□ -0.48
TRPS1-201ENST00000220888 SSH1Q8WYL5 1049 aa12.08□□□□□ -0.48
TRPS1-201ENST00000220888 KIF2AO00139 706 aaPredicted RBP12.08□□□□□ -0.48
TRPS1-201ENST00000220888 GNPATO15228 680 aa12.08□□□□□ -0.48
TRPS1-201ENST00000220888 PANK2Q9BZ23 570 aa12.08□□□□□ -0.48
TRPS1-201ENST00000220888 SLU7O95391 586 aaKnown RBP12.07□□□□□ -0.48
TRPS1-201ENST00000220888 BIRC2Q13490 618 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 GPR162Q16538 588 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 XAGE3Q8WTP9 111 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 SPAG5Q96R06 1193 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 BMP15O95972 392 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 BAG6P46379 1132 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 IFI16Q16666 785 aaKnown RBP12.07□□□□□ -0.48
TRPS1-201ENST00000220888 HSPA2P54652 639 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 TCIRG1Q13488 830 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 HLTFQ14527 1009 aaKnown RBP eCLIP12.07□□□□□ -0.48
TRPS1-201ENST00000220888 MSANTD4Q8NCY6 345 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 DDX12PQ92771 950 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 HOOK2Q96ED9 719 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 RMND1Q9NWS8 449 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 WDR7Q9Y4E6 1490 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 TRIM47Q96LD4 638 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 NEK1Q96PY6 1258 aa12.07□□□□□ -0.48
TRPS1-201ENST00000220888 MAGEB6P1A0A0J9YX57 407 aa12.06□□□□□ -0.48
TRPS1-201ENST00000220888 CASQ1P31415 396 aa12.06□□□□□ -0.48
TRPS1-201ENST00000220888 RAB11FIP4Q86YS3 637 aa12.06□□□□□ -0.48
TRPS1-201ENST00000220888 MRVI1Q9Y6F6 885 aa12.06□□□□□ -0.48
TRPS1-201ENST00000220888 SP4Q02446 784 aa12.06□□□□□ -0.48
TRPS1-201ENST00000220888 SLFN5Q08AF3 891 aa12.06□□□□□ -0.48
TRPS1-201ENST00000220888 HMG20BQ9P0W2 317 aa12.06□□□□□ -0.48
TRPS1-201ENST00000220888 BCCIPQ9P287 314 aaKnown RBP eCLIP12.06□□□□□ -0.48
TRPS1-201ENST00000220888 COPS6Q7L5N1 327 aa12.06□□□□□ -0.48
TRPS1-201ENST00000220888 CNBD1Q8NA66 436 aa12.06□□□□□ -0.48
TRPS1-201ENST00000220888 TTC12Q9H892 705 aaPredicted RBP12.06□□□□□ -0.48
TRPS1-201ENST00000220888 ZBTB43O43298 467 aa12.06□□□□□ -0.48
TRPS1-201ENST00000220888 LDHBP07195 334 aaKnown RBP12.06□□□□□ -0.48
TRPS1-201ENST00000220888 RRP36Q96EU6 259 aaKnown RBP12.06□□□□□ -0.48
TRPS1-201ENST00000220888 DDX23Q9BUQ8 820 aaKnown RBP12.06□□□□□ -0.48
TRPS1-201ENST00000220888 C19orf44Q9H6X5 657 aa12.06□□□□□ -0.48
TRPS1-201ENST00000220888 ARHGEF11O15085 1522 aa12.05□□□□□ -0.48
TRPS1-201ENST00000220888 POLA1P09884 1462 aaPredicted RBP12.05□□□□□ -0.48
TRPS1-201ENST00000220888 PLEKHH1Q9ULM0 1364 aa12.05□□□□□ -0.48
TRPS1-201ENST00000220888 TOPBP1Q92547 1522 aa12.05□□□□□ -0.48
TRPS1-201ENST00000220888 KIAA0586Q9BVV6 1533 aa12.05□□□□□ -0.48
TRPS1-201ENST00000220888 ANXA1P04083 346 aa12.05□□□□□ -0.48
TRPS1-201ENST00000220888 RTN1Q16799 776 aa12.05□□□□□ -0.48
TRPS1-201ENST00000220888 TNPO1Q92973 898 aaKnown RBP12.05□□□□□ -0.48
TRPS1-201ENST00000220888 CCDC102BQ68D86 513 aa12.05□□□□□ -0.48
TRPS1-201ENST00000220888 TMCO3Q6UWJ1 677 aa12.05□□□□□ -0.48
TRPS1-201ENST00000220888 MCM9Q9NXL9 1143 aa12.05□□□□□ -0.48
TRPS1-201ENST00000220888 CCNL1Q9UK58 526 aaPredicted RBP12.05□□□□□ -0.48
TRPS1-201ENST00000220888 SLC39A6Q13433 755 aa12.05□□□□□ -0.48
TRPS1-201ENST00000220888 CABLES1Q8TDN4 633 aa12.05□□□□□ -0.48
TRPS1-201ENST00000220888 FAM13AO94988 1023 aa12.04□□□□□ -0.48
TRPS1-201ENST00000220888 PDE6BP35913 854 aa12.04□□□□□ -0.48
TRPS1-201ENST00000220888 IL15P40933 162 aaPredicted RBP12.04□□□□□ -0.48
TRPS1-201ENST00000220888 STAT6P42226 847 aa12.04□□□□□ -0.48
TRPS1-201ENST00000220888 KIAA0753Q2KHM9 967 aa12.04□□□□□ -0.48
TRPS1-201ENST00000220888 TTC6Q86TZ1 520 aa12.04□□□□□ -0.48
TRPS1-201ENST00000220888 CDCA7Q9BWT1 371 aaPredicted RBP12.04□□□□□ -0.48
TRPS1-201ENST00000220888 ZBTB21Q9ULJ3 1066 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms