RNA–Protein interactions for RNA: ENST00000081029.7

MRPS35-201, Transcript of mitochondrial ribosomal protein S35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS35, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35-201ENST00000081029 COL11A2P13942 1736 aaPredicted RBP13.31□□□□□ -0.28
MRPS35-201ENST00000081029 TRIM27P14373 513 aa13.31□□□□□ -0.28
MRPS35-201ENST00000081029 HOXA10P31260 410 aaPredicted RBP13.31□□□□□ -0.28
MRPS35-201ENST00000081029 ARHGAP45Q92619 1136 aa13.31□□□□□ -0.28
MRPS35-201ENST00000081029 CHMP3Q9Y3E7 222 aa13.31□□□□□ -0.28
MRPS35-201ENST00000081029 CDHR2Q9BYE9 1310 aa13.3□□□□□ -0.28
MRPS35-201ENST00000081029 NBPF7P0C2Y1 421 aaPredicted RBP13.3□□□□□ -0.28
MRPS35-201ENST00000081029 CCT4P50991 539 aaKnown RBP13.3□□□□□ -0.28
MRPS35-201ENST00000081029 PDE3AQ14432 1141 aa13.3□□□□□ -0.28
MRPS35-201ENST00000081029 SF3B3Q15393 1217 aaKnown RBP13.3□□□□□ -0.28
MRPS35-201ENST00000081029 CCDC152Q4G0S7 254 aa13.3□□□□□ -0.28
MRPS35-201ENST00000081029 CRAMP1Q96RY5 1269 aa13.3□□□□□ -0.28
MRPS35-201ENST00000081029 TMX4Q9H1E5 349 aaPredicted RBP13.3□□□□□ -0.28
MRPS35-201ENST00000081029 SEC31BQ9NQW1 1179 aa13.3□□□□□ -0.28
MRPS35-201ENST00000081029 ABCC4O15439 1325 aa13.3□□□□□ -0.28
MRPS35-201ENST00000081029 CTSWP56202 376 aa13.29□□□□□ -0.28
MRPS35-201ENST00000081029 CACNA1SQ13698 1873 aa13.29□□□□□ -0.28
MRPS35-201ENST00000081029 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
MRPS35-201ENST00000081029 SLX4Q8IY92 1834 aa13.29□□□□□ -0.28
MRPS35-201ENST00000081029 PPEF1O14829 653 aaPredicted RBP13.29□□□□□ -0.28
MRPS35-201ENST00000081029 SLC51AQ86UW1 340 aa13.29□□□□□ -0.28
MRPS35-201ENST00000081029 TTLL11Q8NHH1 800 aa13.29□□□□□ -0.28
MRPS35-201ENST00000081029 CELF1Q92879 486 aaKnown RBP13.29□□□□□ -0.28
MRPS35-201ENST00000081029 BRCA1P38398 1863 aaKnown RBP13.28□□□□□ -0.28
MRPS35-201ENST00000081029 RIC1Q4ADV7 1423 aa13.28□□□□□ -0.28
MRPS35-201ENST00000081029 CASP7P55210 303 aa13.28□□□□□ -0.28
MRPS35-201ENST00000081029 GRAPQ13588 217 aa13.28□□□□□ -0.28
MRPS35-201ENST00000081029 GRAPLQ8TC17 118 aaPredicted RBP13.28□□□□□ -0.28
MRPS35-201ENST00000081029 USP44Q9H0E7 712 aa13.28□□□□□ -0.28
MRPS35-201ENST00000081029 GREM2Q9H772 168 aa13.28□□□□□ -0.28
MRPS35-201ENST00000081029 DDX60Q8IY21 1712 aaKnown RBP13.27□□□□□ -0.28
MRPS35-201ENST00000081029 BBOX1O75936 387 aa13.27□□□□□ -0.28
MRPS35-201ENST00000081029 RASSF7Q02833 373 aa13.27□□□□□ -0.28
MRPS35-201ENST00000081029 DLEC1Q9Y238 1755 aa13.27□□□□□ -0.28
MRPS35-201ENST00000081029 RPS8P62241 208 aaKnown RBP13.27□□□□□ -0.29
MRPS35-201ENST00000081029 EPHA10Q5JZY3 1008 aa13.27□□□□□ -0.29
MRPS35-201ENST00000081029 LMBR1LQ6UX01 489 aa13.27□□□□□ -0.29
MRPS35-201ENST00000081029 PANK1Q8TE04 598 aa13.27□□□□□ -0.29
MRPS35-201ENST00000081029 C7orf43Q8WVR3 580 aa13.27□□□□□ -0.29
MRPS35-201ENST00000081029 SUCLG2Q96I99 432 aa13.27□□□□□ -0.29
MRPS35-201ENST00000081029 CCDC136Q96JN2 1154 aa13.27□□□□□ -0.29
MRPS35-201ENST00000081029 TAF1P21675 1872 aa13.27□□□□□ -0.29
MRPS35-201ENST00000081029 LAMB2P55268 1798 aa13.26□□□□□ -0.29
MRPS35-201ENST00000081029 FOXO4P98177 505 aa13.26□□□□□ -0.29
MRPS35-201ENST00000081029 CCDC93Q567U6 631 aa13.26□□□□□ -0.29
MRPS35-201ENST00000081029 SOGA3Q5TF21 947 aa13.26□□□□□ -0.29
MRPS35-201ENST00000081029 DZIP1LQ8IYY4 767 aaKnown RBP13.26□□□□□ -0.29
MRPS35-201ENST00000081029 TMEM57Q8N5G2 664 aa13.26□□□□□ -0.29
MRPS35-201ENST00000081029 UBTFL1P0CB47 393 aaPredicted RBP13.25□□□□□ -0.29
MRPS35-201ENST00000081029 ITGA6P23229 1130 aa13.25□□□□□ -0.29
MRPS35-201ENST00000081029 YY1P25490 414 aa13.25□□□□□ -0.29
MRPS35-201ENST00000081029 FAM161AQ3B820 660 aa13.25□□□□□ -0.29
MRPS35-201ENST00000081029 INTS3Q68E01 1043 aaKnown RBP13.25□□□□□ -0.29
MRPS35-201ENST00000081029 ANKRD18AQ8IVF6 992 aa13.25□□□□□ -0.29
MRPS35-201ENST00000081029 ITPRIPQ8IWB1 547 aa13.25□□□□□ -0.29
MRPS35-201ENST00000081029 PLA2G12BQ9BX93 195 aa13.25□□□□□ -0.29
MRPS35-201ENST00000081029 ATP6V0A2Q9Y487 856 aa13.25□□□□□ -0.29
MRPS35-201ENST00000081029 RTKN2Q8IZC4 609 aa13.25□□□□□ -0.29
MRPS35-201ENST00000081029 CDC5LQ99459 802 aaKnown RBP13.25□□□□□ -0.29
MRPS35-201ENST00000081029 MEIS3Q99687 375 aa13.25□□□□□ -0.29
MRPS35-201ENST00000081029 TAOK3Q9H2K8 898 aa13.25□□□□□ -0.29
MRPS35-201ENST00000081029 BICC1Q9H694 974 aaKnown RBP13.25□□□□□ -0.29
MRPS35-201ENST00000081029 NSFL1CQ9UNZ2 370 aaKnown RBP13.25□□□□□ -0.29
MRPS35-201ENST00000081029 ARFGEF1Q9Y6D6 1849 aa13.24□□□□□ -0.29
MRPS35-201ENST00000081029 NFKBIEO00221 500 aa13.24□□□□□ -0.29
MRPS35-201ENST00000081029 CSF1RP07333 972 aa13.24□□□□□ -0.29
MRPS35-201ENST00000081029 RLBP1P12271 317 aa13.24□□□□□ -0.29
MRPS35-201ENST00000081029 IFIT5Q13325 482 aaKnown RBP13.24□□□□□ -0.29
MRPS35-201ENST00000081029 CCDC57Q2TAC2 916 aa13.24□□□□□ -0.29
MRPS35-201ENST00000081029 TAF7LQ5H9L4 462 aa13.24□□□□□ -0.29
MRPS35-201ENST00000081029 C9orf131Q5VYM1 1079 aa13.24□□□□□ -0.29
MRPS35-201ENST00000081029 SP8Q8IXZ3 490 aa13.24□□□□□ -0.29
MRPS35-201ENST00000081029 RNF181Q9P0P0 153 aa13.24□□□□□ -0.29
MRPS35-201ENST00000081029 ANKRD18BA2A2Z9 1011 aa13.23□□□□□ -0.29
MRPS35-201ENST00000081029 IGHMBP2P38935 993 aaKnown RBP13.23□□□□□ -0.29
MRPS35-201ENST00000081029 KAZALD1Q96I82 304 aa13.23□□□□□ -0.29
MRPS35-201ENST00000081029 MPHOSPH8Q99549 860 aa13.23□□□□□ -0.29
MRPS35-201ENST00000081029 ZNF277Q9NRM2 450 aaPredicted RBP13.23□□□□□ -0.29
MRPS35-201ENST00000081029 COG6Q9Y2V7 657 aa13.23□□□□□ -0.29
MRPS35-201ENST00000081029 UTYO14607 1347 aa13.23□□□□□ -0.29
MRPS35-201ENST00000081029 CC2D2BQ6DHV5 1058 aa13.23□□□□□ -0.29
MRPS35-201ENST00000081029 DPP8Q6V1X1 898 aaPredicted RBP13.23□□□□□ -0.29
MRPS35-201ENST00000081029 MPNDQ8N594 471 aa13.23□□□□□ -0.29
MRPS35-201ENST00000081029 ZNF594Q96JF6 807 aaPredicted RBP13.23□□□□□ -0.29
MRPS35-201ENST00000081029 ANKIB1Q9P2G1 1089 aa13.23□□□□□ -0.29
MRPS35-201ENST00000081029 LRRFIP2Q9Y608 721 aaKnown RBP13.23□□□□□ -0.29
MRPS35-201ENST00000081029 MS4A1P11836 297 aa13.22□□□□□ -0.29
MRPS35-201ENST00000081029 LMNB1P20700 586 aa13.22□□□□□ -0.29
MRPS35-201ENST00000081029 MYH3P11055 1940 aa13.21□□□□□ -0.29
MRPS35-201ENST00000081029 GNAI3P08754 354 aa13.21□□□□□ -0.29
MRPS35-201ENST00000081029 PRELPP51888 382 aa13.21□□□□□ -0.29
MRPS35-201ENST00000081029 FKBP4Q02790 459 aaKnown RBP eCLIP13.21□□□□□ -0.29
MRPS35-201ENST00000081029 TMC4Q7Z404 712 aa13.21□□□□□ -0.29
MRPS35-201ENST00000081029 C6orf229H3BNL8 230 aa13.21□□□□□ -0.3
MRPS35-201ENST00000081029 GPSM2P81274 684 aa13.21□□□□□ -0.3
MRPS35-201ENST00000081029 ZNF526Q8TF50 670 aaPredicted RBP13.21□□□□□ -0.3
MRPS35-201ENST00000081029 HDAC5Q9UQL6 1122 aa13.21□□□□□ -0.3
MRPS35-201ENST00000081029 COL4A1P02462 1669 aa13.2□□□□□ -0.3
MRPS35-201ENST00000081029 CHD4Q14839 1912 aa13.2□□□□□ -0.3
MRPS35-201ENST00000081029 LDHAL6AQ6ZMR3 332 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms