RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 PLBD2Q8NHP8 589 aa12.86□□□□□ -0.35
RGPD5-201ENST00000016946 BRF1Q92994 677 aa12.86□□□□□ -0.35
RGPD5-201ENST00000016946 DNAI2Q9GZS0 605 aa12.86□□□□□ -0.35
RGPD5-201ENST00000016946 TCP11L1Q9NUJ3 509 aa12.86□□□□□ -0.35
RGPD5-201ENST00000016946 GRM1Q13255 1194 aa12.86□□□□□ -0.35
RGPD5-201ENST00000016946 SKAP1Q86WV1 359 aa12.86□□□□□ -0.35
RGPD5-201ENST00000016946 ADGRL2O95490 1459 aa12.86□□□□□ -0.35
RGPD5-201ENST00000016946 CTTNBP2Q8WZ74 1663 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 MCMDC2Q4G0Z9 681 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 MAPKBP1O60336 1514 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 FAM89AQ96GI7 184 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 TSG101Q99816 390 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 PAG1Q9NWQ8 432 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 LMOD1P29536 600 aaPredicted RBP12.85□□□□□ -0.35
RGPD5-201ENST00000016946 SLC52A2Q9HAB3 445 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 PZPP20742 1482 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 MCM4P33991 863 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 GNAQP50148 359 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 RAB11FIP4Q86YS3 637 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 SLC26A6Q9BXS9 759 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 TMEM94Q12767 1356 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 NUCB1Q02818 461 aa12.85□□□□□ -0.35
RGPD5-201ENST00000016946 KLF18A0A0U1RQI7 1052 aa12.84□□□□□ -0.35
RGPD5-201ENST00000016946 COL17A1Q9UMD9 1497 aaPredicted RBP12.84□□□□□ -0.35
RGPD5-201ENST00000016946 MAGEB6P1A0A0J9YX57 407 aa12.84□□□□□ -0.35
RGPD5-201ENST00000016946 IGHDP01880 384 aa12.84□□□□□ -0.35
RGPD5-201ENST00000016946 LDHBP07195 334 aaKnown RBP12.84□□□□□ -0.35
RGPD5-201ENST00000016946 POTEJP0CG39 1038 aa12.84□□□□□ -0.35
RGPD5-201ENST00000016946 GNAT2P19087 354 aa12.84□□□□□ -0.35
RGPD5-201ENST00000016946 APBA3O96018 575 aa12.84□□□□□ -0.35
RGPD5-201ENST00000016946 NBPF7P0C2Y1 421 aaPredicted RBP12.84□□□□□ -0.35
RGPD5-201ENST00000016946 SDSP20132 328 aa12.84□□□□□ -0.35
RGPD5-201ENST00000016946 LARP6Q9BRS8 491 aaKnown RBP12.84□□□□□ -0.35
RGPD5-201ENST00000016946 IL27Q8NEV9 243 aa12.84□□□□□ -0.35
RGPD5-201ENST00000016946 CALML4Q96GE6 196 aa12.84□□□□□ -0.35
RGPD5-201ENST00000016946 TTC41PQ6P2S7 1318 aa12.84□□□□□ -0.35
RGPD5-201ENST00000016946 ZBTB43O43298 467 aa12.83□□□□□ -0.35
RGPD5-201ENST00000016946 DNAJC10Q8IXB1 793 aa12.83□□□□□ -0.35
RGPD5-201ENST00000016946 IFIT1BQ5T764 474 aaKnown RBP12.83□□□□□ -0.36
RGPD5-201ENST00000016946 TRMT1LQ7Z2T5 733 aaKnown RBP12.83□□□□□ -0.36
RGPD5-201ENST00000016946 CCDC148Q8NFR7 591 aa12.83□□□□□ -0.36
RGPD5-201ENST00000016946 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
RGPD5-201ENST00000016946 MCM9Q9NXL9 1143 aa12.83□□□□□ -0.36
RGPD5-201ENST00000016946 SAMM50Q9Y512 469 aa12.83□□□□□ -0.36
RGPD5-201ENST00000016946 C16orf71Q8IYS4 520 aaPredicted RBP12.83□□□□□ -0.36
RGPD5-201ENST00000016946 RNF113AO15541 343 aaKnown RBP12.83□□□□□ -0.36
RGPD5-201ENST00000016946 IDEP14735 1019 aa12.83□□□□□ -0.36
RGPD5-201ENST00000016946 UBA7P41226 1012 aa12.83□□□□□ -0.36
RGPD5-201ENST00000016946 TNNT3P45378 269 aaPredicted RBP12.83□□□□□ -0.36
RGPD5-201ENST00000016946 PER1O15534 1290 aaPredicted RBP12.83□□□□□ -0.36
RGPD5-201ENST00000016946 TFCP2Q12800 502 aa12.83□□□□□ -0.36
RGPD5-201ENST00000016946 CAMK4Q16566 473 aa12.83□□□□□ -0.36
RGPD5-201ENST00000016946 CFAP100Q494V2 611 aa12.83□□□□□ -0.36
RGPD5-201ENST00000016946 CCDC191Q8NCU4 936 aa12.83□□□□□ -0.36
RGPD5-201ENST00000016946 MAST1Q9Y2H9 1570 aa12.83□□□□□ -0.36
RGPD5-201ENST00000016946 UFL1O94874 794 aa12.83□□□□□ -0.36
RGPD5-201ENST00000016946 KLHL10Q6JEL2 608 aa12.82□□□□□ -0.36
RGPD5-201ENST00000016946 LGR6Q9HBX8 967 aa12.82□□□□□ -0.36
RGPD5-201ENST00000016946 METTL22Q9BUU2 404 aaPredicted RBP12.82□□□□□ -0.36
RGPD5-201ENST00000016946 PCDHB15Q9Y5E8 787 aa12.82□□□□□ -0.36
RGPD5-201ENST00000016946 GJB2P29033 226 aa12.82□□□□□ -0.36
RGPD5-201ENST00000016946 FILIP1Q7Z7B0 1213 aa12.82□□□□□ -0.36
RGPD5-201ENST00000016946 EYA2O00167 538 aa12.82□□□□□ -0.36
RGPD5-201ENST00000016946 HCLS1P14317 486 aaPredicted RBP12.82□□□□□ -0.36
RGPD5-201ENST00000016946 TNNI2P48788 182 aa12.82□□□□□ -0.36
RGPD5-201ENST00000016946 FKBP15Q5T1M5 1219 aa12.82□□□□□ -0.36
RGPD5-201ENST00000016946 ANO10Q9NW15 660 aa12.82□□□□□ -0.36
RGPD5-201ENST00000016946 RBM8AQ9Y5S9 174 aaKnown RBP12.82□□□□□ -0.36
RGPD5-201ENST00000016946 AMPD3Q01432 767 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 TTC6Q86TZ1 520 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 FBXO3Q9UK99 471 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 DENND2AQ9ULE3 1009 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 A1BGP04217 495 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 CCDC181Q5TID7 509 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 CEP85Q6P2H3 762 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 LIG1P18858 919 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 MIGA1Q8NAN2 632 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 CNNM3Q8NE01 707 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 PPFIA3O75145 1194 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 ITGA6P23229 1130 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 TEX35Q5T0J7 233 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 NPC1L1Q9UHC9 1359 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 PDE8AO60658 829 aa12.81□□□□□ -0.36
RGPD5-201ENST00000016946 FGFR1OPO95684 399 aaKnown RBP12.81□□□□□ -0.36
RGPD5-201ENST00000016946 ZNF496Q96IT1 587 aaPredicted RBP12.8□□□□□ -0.36
RGPD5-201ENST00000016946 BICC1Q9H694 974 aaKnown RBP12.8□□□□□ -0.36
RGPD5-201ENST00000016946 DCTPP1Q9H773 170 aa12.8□□□□□ -0.36
RGPD5-201ENST00000016946 RTN1Q16799 776 aa12.8□□□□□ -0.36
RGPD5-201ENST00000016946 ZNF397Q8NF99 534 aaPredicted RBP12.8□□□□□ -0.36
RGPD5-201ENST00000016946 STXBP4Q6ZWJ1 553 aa12.8□□□□□ -0.36
RGPD5-201ENST00000016946 PYM1Q9BRP8 204 aaKnown RBP12.8□□□□□ -0.36
RGPD5-201ENST00000016946 H0YIN7 160 aa12.8□□□□□ -0.36
RGPD5-201ENST00000016946 ERMNQ8TAM6 284 aa12.8□□□□□ -0.36
RGPD5-201ENST00000016946 GGA1Q9UJY5 639 aa12.8□□□□□ -0.36
RGPD5-201ENST00000016946 CHL1O00533 1208 aa12.8□□□□□ -0.36
RGPD5-201ENST00000016946 STX6O43752 255 aa12.8□□□□□ -0.36
RGPD5-201ENST00000016946 NEBLO76041 1014 aa12.8□□□□□ -0.36
RGPD5-201ENST00000016946 ERVV-2B6SEH9 535 aa12.8□□□□□ -0.36
RGPD5-201ENST00000016946 NMIQ13287 307 aaPredicted RBP12.8□□□□□ -0.36
RGPD5-201ENST00000016946 ESYT1Q9BSJ8 1104 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms