RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Ddx46Q569Z5 1032 aaKnown RBP12.14□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Tbc1d30Q69ZT9 766 aa12.14□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Kank4Q6P9J5 1016 aa12.14□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ankib1Q6ZPS6 1085 aa12.14□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Asap2Q7SIG6 958 aa12.14□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Aox1O54754 1333 aa12.13□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Syce3B5KM66 88 aa12.13□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Kif4P33174 1231 aa12.13□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ccdc129Q14B48 1034 aa12.13□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Smg7Q5RJH6 1138 aaKnown RBP12.13□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Clca2Q8BG22 942 aa12.13□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 ApobrQ8VBT6 942 aa12.13□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Npc1l1Q6T3U4 1333 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Slc4a1P04919 929 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Cyp19a1P28649 503 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Mctp2Q5RJH2 878 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Nol12Q8BG17 217 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Tceanc2Q8R2M0 207 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ppil4Q9CXG3 492 aaKnown RBP12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Hdac6Q9Z2V5 1149 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Kat6bQ8BRB7 1872 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ssc5dQ8BV57 1371 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 FanccP50652 591 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Plcb3P51432 1234 aaKnown RBP12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Gsdma2Q32M21 443 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Tmem266Q8BZB3 538 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ptcd1Q8C2E4 695 aaKnown RBP12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Zfp113Q8C689 439 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Plcd4Q8K3R3 807 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Krt25Q8VCW2 446 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Lrrfip2Q91WK0 415 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Erc1Q99MI1 1120 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Rdm1Q9CQK3 281 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Pus3Q9JI38 481 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Zeb2Q9R0G7 1215 aa12.12□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Gnl3lQ6PGG6 577 aaKnown RBP12.11□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Kdm4aQ8BW72 1064 aa12.11□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Golim4Q8BXA1 655 aa12.11□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 E4f1Q8CCE9 783 aa12.11□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 MetP16056 1379 aa12.11□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Dcaf5Q80T85 946 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ttc19Q8CC21 365 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Tubb6Q922F4 447 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Mast2Q60592 1734 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Myh1Q5SX40 1942 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Myh7Q91Z83 1935 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Hspa1lP16627 641 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 PtmaP26350 111 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ube2hP62257 183 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ctdnep1Q3TP92 244 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Leo1Q5XJE5 667 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Sik1Q60670 779 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Adam1aQ60813 791 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Tsr2Q8C8T8 191 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ccdc178Q8CDV0 866 aa12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 NaspQ99MD9 773 aaKnown RBP12.1□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ppp1r10Q80W00 888 aaKnown RBP12.09□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ncoa5Q91W39 579 aaKnown RBP12.09□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Chmp3Q9CQ10 224 aa12.09□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Bloc1s2Q9CWG9 143 aa12.09□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ankrd31A0A140LI88 1765 aa12.09□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Kdm3aQ6PCM1 1323 aa12.09□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Lrp5Q91VN0 1614 aa12.08□□□□□ -0.47
Cpsf3-211ENSMUST00000222968 Ftl2P49945 183 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Usp48Q3V0C5 1052 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Znf526Q8BI66 675 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Nwd2Q6P5U7 1742 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Irgm2A0A140LIF8 407 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Cyp3a57D3YYZ0 503 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Prl7a2O54831 253 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Fkbp1aP26883 108 aaKnown RBP12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Cd22P35329 862 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Stat1P42225 749 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Ppp6r1Q7TSI3 856 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Zscan22Q8BGS5 496 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Me3Q8BMF3 604 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Cep57l1Q8VDS7 400 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Ipo4Q8VI75 1082 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Nip7Q9CXK8 180 aaKnown RBP12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Fam84aQ9D650 292 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Ybx3Q9JKB3 361 aaKnown RBP12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Trim44Q9QXA7 346 aa12.08□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Fer1l6E0CZ42 1862 aa12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Atp8b3Q6UQ17 1335 aa12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Exosc10P56960 887 aaKnown RBP12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Hspd1P63038 573 aaKnown RBP12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Atp8a2P98200 1148 aa12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Pde4dQ01063 747 aa12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Igflr1Q3U4N7 345 aa12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 EappQ5BU09 281 aa12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Naa30Q8CES0 364 aa12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Ginm1Q91WR6 327 aa12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Lrrc59Q922Q8 307 aaKnown RBP12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Med4Q9CQA5 270 aa12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Igbp1bQ9QZ29 343 aa12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 TnksQ6PFX9 1320 aa12.07□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 TsksO54887 585 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Gpr182P43142 395 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Ccdc66Q6NS45 935 aa12.06□□□□□ -0.48
Cpsf3-211ENSMUST00000222968 Wdr24Q8CFJ9 790 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms