RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Prl3d2F6R3P9 224 aa16.05■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Cops6O88545 324 aa16.05■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Trim11Q99PQ2 467 aa16.05■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Erbb4Q61527 1308 aa16.05■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Zkscan7E9PVW1 718 aa16.05■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Snrpa1P57784 255 aaKnown RBP16.05■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Rasa1E9PYG6 1038 aa16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Nek11Q8C0Q4 628 aa16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Abcc12Q80WJ6 1366 aa16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 ShprhQ7TPQ3 1674 aa16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Stat1P42225 749 aa16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 RestQ8VIG1 1082 aa16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Ces1hD3Z298 562 aa16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Stim1P70302 685 aa16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Sde2Q8K1J5 448 aaKnown RBP16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Stx6Q9JKK1 255 aa16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Ces1aE9PYP1 563 aa16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 LyarQ08288 388 aaKnown RBP16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Sass6Q80UK7 654 aa16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 LarsQ8BMJ2 1178 aa16.04■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Iqgap3F8VQ29 1632 aa16.03■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Nphp3Q7TNH6 1325 aa16.03■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Eya2O08575 532 aa16.03■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Atf5O70191 283 aa16.03■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Cbx1P83917 185 aaKnown RBP16.03■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Znf18Q810A1 556 aa16.03■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Tmem119Q8R138 280 aa16.03■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Cdk12Q14AX6 1484 aaKnown RBP16.02■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Samd1D3YXK1 519 aa16.02■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Ube2hP62257 183 aa16.02■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Cnnm2Q3TWN3 875 aa16.02■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Tubb4aQ9D6F9 444 aa16.02■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Setd1aE9PYH6 1716 aa16.02■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Igbp1bQ9QZ29 343 aa16.02■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Rlbp1Q9Z275 317 aa16.02■□□□□ 0.16
Pcdha1-202ENSMUST00000193839 Gm21985Q6P6P5 1106 aa16.02■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Galntl5Q9D4M9 431 aa16.02■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 TnrQ8BYI9 1358 aa16.02■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 RereQ80TZ9 1558 aa16.02■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Larp1Q6ZQ58 1072 aaKnown RBP16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Tango6Q8C3S2 1079 aa16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Bloc1s2Q9CWG9 143 aa16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Iqca1Q9CUL5 857 aa16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Mrpl44Q9CY73 333 aaKnown RBP16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Kcnn1Q9EQR3 537 aa16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Tmem2Q5FWI3 1383 aa16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 AceP09470 1312 aa16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Abcf1Q6P542 837 aaKnown RBP16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Mrpl12Q9DB15 201 aaKnown RBP16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 SelenooQ9DBC0 667 aa16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Cyp2ab1S4R196 498 aa16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 CemipQ8BI06 1361 aa16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Pet2A2AHY8 747 aa16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Jdp2P97875 163 aa16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 TxlnbQ8VBT1 685 aa16.01■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Adcy5P84309 1262 aa16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Hand2Q61039 217 aa16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Clcn1Q64347 994 aa16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 MthfsQ9D110 203 aa16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Adamts13Q769J6 1426 aa16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 HmmrQ00547 794 aaKnown RBP16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 CoilQ5SU73 570 aa16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Gnat2P50149 354 aa16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Cct2P80314 535 aaKnown RBP16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Vps37dQ810I0 261 aa16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Tecpr2Q3UH45 1423 aa16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Sh3tc1G3X9F6 1346 aa16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Gemin5Q8BX17 1502 aaKnown RBP16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Catsper2A2ARP9 588 aa16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Foxo3Q9WVH4 672 aa16■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 NmiO35309 314 aa15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Sult6b1P0CC03 303 aa15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Lrrfip1Q3UZ39 729 aaKnown RBP15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Disp3A3KFU9 1347 aa15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Ccdc172Q810N9 267 aa15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Ccdc178Q8CDV0 866 aa15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Itsn2Q9Z0R6 1659 aa15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Cdc42bpbQ7TT50 1713 aa15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Metap2O08663 478 aaKnown RBP15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 InhbeO08717 350 aa15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Cfap157Q0VFX2 523 aa15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Cfap45Q9D9U9 551 aa15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Zbtb43Q9DAI4 467 aa15.99■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Rad23bP54728 416 aa15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Itga6Q61739 1091 aa15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Miga2Q8BK03 593 aa15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Slx4ipQ9D7Y9 413 aa15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Iqgap1Q9JKF1 1657 aaKnown RBP15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Kidins220E9Q9B7 1793 aa15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 NppbP40753 121 aa15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Ccdc150Q8CDI7 1110 aa15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Ankrd1Q9CR42 319 aa15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Ccdc94Q9D6J3 314 aa15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Ampd3O08739 766 aa15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Nap1l5Q9JJF0 156 aa15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Glg1Q61543 1175 aaKnown RBP15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Cnot6lQ8VEG6 555 aa15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Luc7lQ9CYI4 371 aaKnown RBP15.98■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Cdan1Q8CC12 1239 aa15.97■□□□□ 0.15
Pcdha1-202ENSMUST00000193839 Stxbp4Q9WV89 557 aa15.97■□□□□ 0.15
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms