RNA–Protein interactions for RNA: ENSMUST00000100064.8

Scn9a-202, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Scn9a, Length 9,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-202ENSMUST00000100064 Ranbp6Q8BIV3 1105 aa11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Dhx9O70133 1380 aaKnown RBP11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Tex35Q14BK3 207 aa11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 CactinQ9CS00 772 aaKnown RBP11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Mrpl44Q9CY73 333 aaKnown RBP11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Uso1Q9Z1Z0 959 aaKnown RBP11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Map3k1P53349 1493 aa11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Mlh3A0A1Y7VMP7 1443 aa11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Hand2Q61039 217 aa11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Exoc8Q6PGF7 716 aa11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Ccdc122Q8BVN0 290 aa11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 NexmifQ5DTT1 1515 aa11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Nlrp2Q4PLS0 1046 aaKnown RBP11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Pde1cQ64338 706 aa11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Homer2Q9QWW1 354 aa11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 ThrspQ62264 150 aa11.84□□□□□ -0.51
Scn9a-202ENSMUST00000100064 Gnat2P50149 354 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Ddx19aQ61655 478 aaKnown RBP11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Taok3Q8BYC6 898 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Serpinc1P32261 465 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 CebpzP53569 1052 aaKnown RBP11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Ttll13A4Q9F6 804 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 SltmQ8CH25 1031 aaKnown RBP11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Fsip1Q9D3V5 435 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Ccdc83Q9D4V3 305 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Psmc4P54775 418 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Il1rapl2Q9ERS6 686 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Chpf2Q3UU43 768 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Ttc12Q8BW49 704 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Mxra7Q9CZH7 178 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Snapc4Q8BP86 1333 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Aox4Q3TYQ9 1336 aa11.83□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Atf7Q8R0S1 413 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Kdm8Q9CXT6 414 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Echdc1Q9D9V3 322 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Spocd1B1ASB6 936 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Nek5Q7TSC3 627 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Baiap2l1Q9DBJ3 514 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Klhl10Q9D5V2 608 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Mx1P09922 631 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Parp1P11103 1013 aaKnown RBP11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Cnot6lQ8VEG6 555 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Msantd4Q91YU3 345 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Tacc3Q9JJ11 631 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Vti1aO89116 217 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Cpa2Q504N0 417 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Eme2Q56A04 373 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Nucb2P81117 420 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Mapkbp1Q6NS57 1503 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Stx1aO35526 288 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Tdo2P48776 406 aa11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Smarca5Q91ZW3 1051 aaKnown RBP11.82□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Atp2a2O55143 1044 aaKnown RBP11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Glt1d1A4FUP9 346 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Gtf3c3Q3TMP1 882 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Gm4981Q3ULJ8 291 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Tbc1d5Q80XQ2 815 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Ccdc113Q8C5T8 377 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Tmod4Q9JLH8 345 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Smc1bQ920F6 1248 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Vps16Q920Q4 839 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Naa16Q9DBB4 864 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Map3k7clP58500 142 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Ccdc57Q6PHN1 1016 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Bbs5Q9CZQ9 341 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 AI481877A2ALV5 1481 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Ppp4r3aQ6P2K6 820 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Exoc1Q8R3S6 894 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 SrrtQ99MR6 875 aaKnown RBP11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Gna11P21278 359 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Zbtb3Q91X45 518 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Naip1Q9QWK5 1403 aa11.81□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Anapc15-psA0A140T8L6 141 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Hace1Q3U0D9 909 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Pls1Q3V0K9 630 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Asic1Q6NXK8 526 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Cep19Q9CQA8 163 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Fam213aQ9CYH2 218 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Prdm11A2AGX3 565 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Sclt1G5E861 688 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Tagap1P0CAX8 505 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Fgfr1opQ66JX5 399 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Tekt3Q6X6Z7 490 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Casp1P29452 402 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 LarsQ8BMJ2 1178 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Rrp1P56183 494 aaKnown RBP11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Ddx24Q9ESV0 857 aaKnown RBP11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Cbfa2t2O70374 594 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Ppp1r1bQ60829 194 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Gbp1Q01514 589 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Fmnl3Q6ZPF4 1028 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Tcp11l1Q8BTG3 509 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 A0A1W2P7S8 802 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 1700018F24RikB2RW27 314 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Map4k4P97820 1233 aaKnown RBP11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Cdc5lQ6A068 802 aaKnown RBP11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Als2cr12Q8BVM7 383 aa11.8□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Hdhd2Q3UGR5 259 aa11.79□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Zscan29E9Q5B4 869 aa11.79□□□□□ -0.52
Scn9a-202ENSMUST00000100064 Dapk3O54784 448 aa11.79□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 48.8 ms