RNA–Protein interactions for RNA: ENSMUST00000100026.9

Ccdc50-203, Transcript of Coiled-coil domain-containing protein 50, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc50, Length 7,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-203ENSMUST00000100026 Nlrp2Q4PLS0 1046 aaKnown RBP17.36■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Fam83gQ5SWY7 812 aa17.36■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 ThemisQ8BGW0 636 aa17.36■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Ccdc191J3QQ27 883 aa17.36■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Amotl1Q9D4H4 968 aa17.36■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Ppfia1B2RXQ2 1266 aa17.36■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Eif6O55135 245 aa17.36■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Mx1P09922 631 aa17.36■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Exoc3Q6KAR6 755 aa17.36■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Bst2Q8R2Q8 172 aa17.36■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Txnrd1Q9JMH6 613 aa17.36■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Ppp1r9aH3BJD6 1292 aa17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Usp25P57080 1055 aa17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Large2Q5XPT3 690 aa17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Nf2P46662 596 aa17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Esco1Q69Z69 843 aa17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Naa16Q9DBB4 864 aa17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Clip2Q9Z0H8 1047 aa17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Mybl2P48972 704 aa17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Abcf1Q6P542 837 aaKnown RBP17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Spag5Q7TME2 1165 aa17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Dennd4bQ3U1Y4 1499 aa17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Naip5Q9R016 1403 aa17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Riok3Q9DBU3 519 aaKnown RBP17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 RragbQ6NTA4 374 aa17.35■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 1700018F24RikB2RW27 314 aa17.34■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Ppp1r9bQ6R891 817 aaKnown RBP17.34■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 AW822073A0A0N4SUK1 652 aa17.34■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Prkg1P0C605 671 aa17.34■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Snrpa1P57784 255 aaKnown RBP17.34■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Ankrd44B2RXR6 993 aa17.33■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 TchpQ3TVW5 497 aa17.33■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Stx6Q9JKK1 255 aa17.33■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Asxl2Q8BZ32 1370 aa17.33■□□□□ 0.37
Ccdc50-203ENSMUST00000100026 Pus7B7ZNL8 666 aaKnown RBP17.33■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Eif4a2P10630 407 aa17.33■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Sun3Q5SS91 320 aa17.33■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Spata24Q6P926 205 aa17.33■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Stx1aO35526 288 aa17.33■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Fchsd1Q6PFY1 688 aa17.33■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Lrsam1Q80ZI6 727 aa17.33■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Akr1c19G3X9Y6 323 aa17.32■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Pa2g4P50580 394 aaKnown RBP17.32■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Tbc1d9Q3UYK3 1264 aa17.32■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Miga2Q8BK03 593 aa17.32■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Pcdhb2Q91Y00 799 aa17.32■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Pla2g4fQ50L41 855 aa17.32■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 SltmQ8CH25 1031 aaKnown RBP17.32■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Uba5Q8VE47 403 aa17.32■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Dbndd1Q9CZ00 160 aa17.32■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Ddx23D3Z0M9 819 aaKnown RBP17.32■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Gnat2P50149 354 aa17.32■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Q4VA45 678 aa17.32■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Ccdc129Q14B48 1034 aa17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 PicalmQ7M6Y3 660 aaKnown RBP17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 TprnA2AI08 749 aaKnown RBP17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Gm44503E9PYU5 387 aa17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Akap2O54931 893 aa17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Dpp7Q9ET22 506 aa17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Parp1P11103 1013 aaKnown RBP17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 MarcksP26645 309 aaKnown RBP17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Naa15Q80UM3 865 aaKnown RBP17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Psrc1Q9D0P7 329 aa17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 CpvlQ9D3S9 478 aa17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Jakmip3Q5DTN8 844 aa17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Asic1Q6NXK8 526 aa17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Kiaa1024Q8K3V7 917 aa17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 PaskQ8CEE6 1383 aa17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Gpr162Q3UN16 588 aa17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Igbp1bQ9QZ29 343 aa17.31■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Ankrd1Q9CR42 319 aa17.3■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Atp8b3Q6UQ17 1335 aa17.3■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Serpinc1P32261 465 aa17.3■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Cyp4f39Q8BGU0 532 aa17.3■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Ccdc122Q8BVN0 290 aa17.3■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Gm18336A0A140LIU8 765 aa17.3■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Tldc2A2ACG1 198 aa17.3■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Mroh7A2AVR2 1279 aa17.3■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Ivns1abpQ920Q8 642 aa17.3■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Speer4f2E9Q366 295 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Map3k12Q60700 888 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Ift122Q6NWV3 1182 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Rdm1Q9CQK3 281 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Mtmr3Q8K296 1196 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Gm30191A0A0U1RNT7 187 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 A0A1W2P7S8 802 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Elf1Q60775 612 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Jarid2Q62315 1234 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Cdc5lQ6A068 802 aaKnown RBP17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Tceanc2Q8R2M0 207 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Rfx7F8VPJ6 1459 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 RbsnQ80Y56 783 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Smc1aQ9CU62 1233 aaKnown RBP17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Znf771Q8BJ90 317 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Prkag2Q91WG5 566 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Rbm8a2A0A0N4SUH6 174 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Pls1Q3V0K9 630 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Skida1Q80YR3 822 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Rbm8aQ9CWZ3 174 aa17.29■□□□□ 0.36
Ccdc50-203ENSMUST00000100026 Cops6O88545 324 aa17.28■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms