RNA–Protein interactions for RNA: ENSMUST00000086483.3

Ccdc60-202, Transcript of Coiled-coil domain-containing protein 60, mousemouse

TSL 1 (best) BASIC

Gene Ccdc60, Length 2,168 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60-202ENSMUST00000086483 NfixP70257 488 aa14.16□□□□□ -0.14
Ccdc60-202ENSMUST00000086483 Cog5Q8C0L8 829 aa14.16□□□□□ -0.14
Ccdc60-202ENSMUST00000086483 AbraQ8BUZ1 375 aa14.16□□□□□ -0.14
Ccdc60-202ENSMUST00000086483 MypnQ5DTJ9 1315 aa14.15□□□□□ -0.14
Ccdc60-202ENSMUST00000086483 Zmynd8A2A484 1235 aaKnown RBP14.15□□□□□ -0.14
Ccdc60-202ENSMUST00000086483 Pibf1E9Q6K3 756 aa14.15□□□□□ -0.14
Ccdc60-202ENSMUST00000086483 Q3TQI7 289 aaKnown RBP14.15□□□□□ -0.14
Ccdc60-202ENSMUST00000086483 Gm2163Q6PCY5 473 aa14.15□□□□□ -0.14
Ccdc60-202ENSMUST00000086483 Klf15Q9EPW2 415 aa14.15□□□□□ -0.14
Ccdc60-202ENSMUST00000086483 Myh1Q5SX40 1942 aa14.15□□□□□ -0.14
Ccdc60-202ENSMUST00000086483 BcorQ8CGN4 1759 aa14.15□□□□□ -0.14
Ccdc60-202ENSMUST00000086483 Podnl1Q6P3Y9 559 aa14.15□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Ptrh1Q8BW00 204 aa14.14□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 MsraQ9D6Y7 233 aa14.14□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Bend4P86174 541 aa14.13□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 EappQ5BU09 281 aa14.13□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Glrx3Q9CQM9 337 aa14.13□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Ppil2Q9D787 521 aa14.13□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Ltb4r2Q9JJL9 360 aa14.13□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 NrapQ80XB4 1728 aa14.13□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Rps8P62242 208 aaKnown RBP14.13□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Psme4Q5SSW2 1843 aa14.13□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Cyp7a1Q64505 503 aa14.12□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Snap47Q8R570 413 aa14.12□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Map3k15A2AQW0 1331 aa14.12□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Heg1E9Q7X6 1337 aa14.12□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 AK157302I3ITR1 129 aa14.12□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Cops6O88545 324 aa14.12□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Hspa2P17156 633 aa14.12□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Gpr37l1Q99JG2 481 aa14.12□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Isca1Q9D924 129 aa14.12□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Cyp19a1P28649 503 aa14.11□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Agtpbp1Q641K1 1218 aa14.11□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Adam39Q7M762 756 aa14.11□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Rpgrip1lQ8CG73 1264 aa14.11□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Naa16Q9DBB4 864 aa14.1□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Prg3Q9JL95 222 aa14.1□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Tanc1Q0VGY8 1856 aa14.1□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Peak1Q69Z38 1735 aa14.1□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Myd88P22366 296 aa14.1□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Slfn1Q9Z0I7 337 aa14.1□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Ttc21aQ8C0S4 1314 aa14.1□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 GptQ8QZR5 496 aa14.09□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Ank1Q02357 1862 aa14.09□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Atf7ipQ7TT18 1306 aa14.09□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Secisbp2lQ6A098 1086 aaKnown RBP14.09□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 WdpcpQ8C456 722 aa14.09□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Rnf181Q9CY62 165 aa14.09□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 EhhadhQ9DBM2 718 aa14.09□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Usp34Q6ZQ93 3582 aa14.08□□□□□ -0.15
Ccdc60-202ENSMUST00000086483 Akap4Q60662 849 aa14.08□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 AaasP58742 546 aa14.07□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Dclk1Q9JLM8 756 aa14.07□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Cap1P40124 474 aa14.07□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Map4k4P97820 1233 aaKnown RBP14.07□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Tll1Q62381 1013 aa14.07□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Sez6lQ6P1D5 963 aa14.07□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Bms1Q6PGF5 1284 aaKnown RBP14.07□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Slc51aQ8R000 340 aa14.07□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Lgr5Q9Z1P4 907 aa14.07□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Greb1lB9EJV3 1913 aa14.07□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Polr2aP08775 1970 aaKnown RBP14.07□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Skint7A7XV04 395 aa14.06□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 CanxP35564 591 aaKnown RBP14.06□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Q3UJP5 209 aa14.06□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Irf9Q61179 399 aa14.06□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 U2surpQ6NV83 1029 aaKnown RBP14.06□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Ddx58Q6Q899 926 aa14.06□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Cnksr1A2A9K7 700 aa14.06□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 D1Pas1P16381 660 aa14.06□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Irf6P97431 467 aa14.06□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Oog3Q3UWY1 500 aa14.06□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 HlfQ8BW74 295 aa14.06□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Kif2cQ922S8 721 aa14.06□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Mageb2A2AHM0 380 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Phrf1A6H619 1682 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Trim34bJ3QNR8 485 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Col3a1P08121 1464 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Clca2Q8BG22 942 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Ehd4Q9EQP2 541 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Sall2Q9QX96 1004 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 UncxO08934 530 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Igflr1Q3U4N7 345 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Cyp4f37Q3V1F1 546 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Trappc12Q8K2L8 797 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 McamQ8R2Y2 648 aaKnown RBP14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Ndfip2Q91ZP6 311 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Cwc25Q9DBF7 416 aa14.05□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 SisF8VQM5 1818 aa14.04□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 4931408C20RikE9PWP9 1381 aa14.04□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Slc10a4Q3UEZ8 437 aa14.04□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Fkbp5Q64378 456 aa14.04□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Aldh1b1Q9CZS1 519 aa14.04□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Stard3nlQ9DCI3 235 aa14.04□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Brca1P48754 1812 aa14.04□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Zbtb38Q3LR78 1197 aa14.03□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Ttll12Q3UDE2 639 aa14.03□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 B230104I21RikQ3USW4 141 aa14.03□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Slc4a7Q8BTY2 1034 aa14.03□□□□□ -0.16
Ccdc60-202ENSMUST00000086483 Tbc1d8Q9Z1A9 1134 aa14.03□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 15.4 ms