RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Fam50bQ9WTJ8 334 aa11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Cct2P80314 535 aaKnown RBP11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Sass6Q80UK7 654 aa11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Ppm1mQ8BU27 406 aa11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Srgap1Q91Z69 1062 aa11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 C3P01027 1663 aa11.57□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Samd1D3YXK1 519 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 RdxP26043 583 aaKnown RBP11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Rab3gap1Q80UJ7 981 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Dhx30Q99PU8 1217 aaKnown RBP11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Fam84aQ9D650 292 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Atp8b3Q6UQ17 1335 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 1700113H08RikE9Q9Q5 327 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Adamtsl3G3UXC7 1706 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Rhot2Q8JZN7 620 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Usp28Q5I043 1051 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Dzip1Q8BMD2 852 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 R3hcc1Q8BSI6 488 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Lmbrd2Q8C561 694 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Dis3l2Q8CI75 870 aaKnown RBP11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Cnpy2Q9QXT0 182 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Nfat5Q9WV30 1534 aa11.56□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Prl7a2O54831 253 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Atp2b3Q0VF55 1220 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 NpeppsQ11011 920 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Nlrp9bQ66X22 1003 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Soga3Q6NZL0 945 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Zfp251Q6PCX8 632 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Zfp317Q8C0Q5 607 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Irx4Q9QY61 515 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Tnnt2P50752 301 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Zranb3Q6NZP1 1069 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Ppp1r10Q80W00 888 aaKnown RBP11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Arid5bQ8BM75 1188 aaKnown RBP11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Ttc27Q8CD92 847 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Pes1Q9EQ61 584 aaKnown RBP11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Tmem2Q5FWI3 1383 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Ltv1Q6NSQ7 470 aaKnown RBP11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Pcdhb15Q91Y04 786 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 PhaxQ9JJT9 385 aaKnown RBP11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Hmgn5Q9JL35 406 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Hmg20bQ9Z104 317 aa11.55□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Cfap58B2RW38 873 aa11.54□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Ccdc158Q8CDI6 1109 aa11.54□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Hnrnpul1Q8VDM6 859 aaKnown RBP11.54□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 TefQ9JLC6 301 aa11.54□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Syt10Q9R0N4 523 aa11.54□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Wdr17E9Q271 1322 aa11.54□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Rims2Q9EQZ7 1530 aa11.54□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Cdkn1cP49919 348 aa11.54□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Atp1a3Q6PIC6 1013 aa11.54□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Golim4Q8BXA1 655 aa11.54□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Nek11Q8C0Q4 628 aa11.54□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Rrs1Q9CYH6 365 aaKnown RBP11.54□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Card6E9PWH2 1175 aa11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Tpm3P21107 285 aaKnown RBP11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 U2af2P26369 475 aaKnown RBP11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 GnpatP98192 678 aa11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Hook1Q8BIL5 728 aa11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Nlrp3Q8R4B8 1033 aa11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Chmp3Q9CQ10 224 aa11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Nid2O88322 1403 aa11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Csrnp1P59054 583 aa11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 ThemisQ8BGW0 636 aa11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 InsrrQ9WTL4 1300 aa11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Alpk3Q924C5 1678 aa11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Plcd3Q8K2J0 785 aa11.53□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Timm10P62073 90 aa11.52□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Ccdc129Q14B48 1034 aa11.52□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Nxf7Q80SZ6 620 aaKnown RBP11.52□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 OptnQ8K3K8 584 aa11.52□□□□□ -0.56
Ccdc40-202ENSMUST00000053440 Col15a1O35206 1367 aa11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Iqsec3Q3TES0 1195 aa11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ddx17Q501J6 650 aaKnown RBP11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Fsd1Q7TPM6 496 aa11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 GphnQ8BUV3 769 aaKnown RBP11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ccz1Q8C1Y8 480 aa11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 MypnQ5DTJ9 1315 aa11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 RubcnlQ3TD16 648 aa11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Limch1Q3UH68 1057 aa11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Fkbp5Q64378 456 aa11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Mb21d2Q8C525 428 aa11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Phkg2Q9DB30 406 aa11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 BcorQ8CGN4 1759 aa11.52□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Sipa1l2Q80TE4 1722 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Tmem87bQ8BKU8 555 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Tsen34Q8BMZ5 316 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Pms1Q8K119 917 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ccer1Q9CQL2 403 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ifi35Q9D8C4 286 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Osbpl5Q9ER64 874 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Aox4Q3TYQ9 1336 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Tbc1d4Q8BYJ6 1307 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Klhl34A2AI76 644 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Adam1bQ8R534 806 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 TkfcQ8VC30 578 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Tlcd1Q99JT6 247 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Gm21698A0A087WQP8 267 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Gm21671G3UY31 267 aa11.51□□□□□ -0.57
Ccdc40-202ENSMUST00000053440 Ripor2Q80U16 1078 aa11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms