RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Ankle2Q6P1H6 964 aa18.82■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 AI481877A2ALV5 1481 aa18.82■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 MycnP03966 462 aaKnown RBP18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 SfswapQ3USH5 945 aaKnown RBP18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Egfem1Q8C088 590 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 KdrP35918 1367 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Ppfia1B2RXQ2 1266 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Smarcad1Q04692 1021 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 SkiQ60698 725 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Rassf4Q8CB96 322 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Klhl30Q8C3F7 581 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Ccdc38Q8CDN8 563 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Gtpbp4Q99ME9 634 aaKnown RBP18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Zbtb43Q9DAI4 467 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Tmod2Q9JKK7 351 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Erich3F6QRE9 1637 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Speer4f2E9Q366 295 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Rimbp2Q80U40 1072 aa18.81■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Senp1P59110 640 aa18.8■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Fam204aQ8C6C7 236 aa18.8■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Gigyf1Q99MR1 1044 aaKnown RBP18.8■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Tacc2Q9JJG0 1149 aa18.8■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Kif5cP28738 956 aaKnown RBP18.8■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Dzip1lQ499E4 774 aa18.8■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Serpinc1P32261 465 aa18.8■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Nek5Q7TSC3 627 aa18.8■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Bin1O08539 588 aaKnown RBP18.8■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Plekho1Q9JIY0 408 aa18.8■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 HellsQ60848 821 aa18.8■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Gm21985Q6P6P5 1106 aa18.8■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Cplx4Q80WM3 160 aa18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Slx4Q6P1D7 1565 aa18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Gpr161B2RPY5 545 aa18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Usp5P56399 858 aaKnown RBP18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Cwc25Q9DBF7 416 aa18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Mcm6P97311 821 aa18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Sycp2lA0A0M3U1B0 842 aa18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Krt8P11679 490 aaKnown RBP18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Ms4a1P19437 291 aa18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Haus1Q8BHX1 278 aa18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Ccdc186Q8C9S4 917 aa18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Klc3Q91W40 508 aa18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Pik3c2gO70167 1506 aa18.79■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Apol10bG3X9K7 334 aa18.78■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Stmn2P55821 179 aa18.78■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 P4ha1Q60715 534 aa18.78■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Ssx2ipQ8VC66 615 aa18.78■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Kcnn1Q9EQR3 537 aa18.78■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Fam135bQ9DAI6 1403 aa18.78■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Lamc3Q9R0B6 1581 aa18.78■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Cct2P80314 535 aaKnown RBP18.78■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 SncbQ91ZZ3 133 aa18.78■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Ppp4r3aQ6P2K6 820 aa18.78■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 WtapQ9ER69 396 aa18.78■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Sec62Q8BU14 398 aaKnown RBP18.77■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Nol11Q8BJW5 723 aaKnown RBP18.77■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Zbtb22Q9Z0G7 638 aa18.77■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Filip1Q9CS72 1211 aa18.77■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Gnat2P50149 354 aa18.77■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Ppp1r21Q3TDD9 780 aa18.77■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Msantd4Q91YU3 345 aa18.77■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Micall1Q8BGT6 870 aa18.77■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Fam177a1Q8BR63 207 aa18.77■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Slc1a4O35874 532 aa18.77■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 Golga1Q9CW79 758 aa18.77■□□□□ 0.6
Ccdc88a-201ENSMUST00000040182 EappQ5BU09 281 aa18.77■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Frat2Q8K025 231 aa18.77■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Spats2Q8K1N4 545 aaKnown RBP18.77■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Mlh3A0A1Y7VMP7 1443 aa18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Gm7347D3YYI9 267 aa18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Dclk3Q8BWQ5 790 aa18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Echdc1Q9D9V3 322 aa18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Tbc1d8Q9Z1A9 1134 aa18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Calm1P0DP26 149 aaKnown RBP18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Calm2P0DP27 149 aaKnown RBP18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Calm3P0DP28 149 aaKnown RBP18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 OvosQ3UU35 1456 aa18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Psmd1Q3TXS7 953 aa18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Ebag9Q9D0V7 213 aa18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Kdm4aQ8BW72 1064 aa18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Hoxb7P09024 217 aa18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Akap8Q9DBR0 687 aaKnown RBP18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Soga3Q6NZL0 945 aa18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Fam160b2Q80YR2 744 aa18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Lmo7E9PYF4 1699 aaKnown RBP18.76■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Arhgef12Q8R4H2 1543 aaKnown RBP18.75■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Cacna2d3Q9Z1L5 1091 aa18.75■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Zfp213E9QAW0 468 aa18.75■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Hirip3Q8BLH7 601 aa18.75■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Klhl10Q9D5V2 608 aa18.75■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Myo1bP46735 1107 aa18.75■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 RragbQ6NTA4 374 aa18.75■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Ddx54Q8K4L0 874 aaKnown RBP18.75■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Ankrd44B2RXR6 993 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 SbdsP70122 250 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Luc7l2Q7TNC4 392 aaKnown RBP18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Abcc5Q9R1X5 1436 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Ppp1r10Q80W00 888 aaKnown RBP18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Krt25Q8VCW2 446 aa18.74■□□□□ 0.59
Ccdc88a-201ENSMUST00000040182 Atad3Q925I1 591 aa18.74■□□□□ 0.59
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms