RNA–Protein interactions for RNA: ENSMUST00000039443.13

Ccdc50-201, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 2,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-201ENSMUST00000039443 Cfap58B2RW38 873 aa22.5■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Oas2E9Q9A9 742 aa22.5■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Ms4a1P19437 291 aa22.5■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 CtifQ6PEE2 600 aaKnown RBP22.5■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Il1rapl2Q9ERS6 686 aa22.5■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Taf7Q9R1C0 341 aa22.5■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Sh3bgrQ9WUZ7 214 aa22.5■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Morc2aQ69ZX6 1030 aa22.5■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Tsr2Q8C8T8 191 aa22.5■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Lins1Q3U1D0 764 aa22.49■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Kiaa0753Q6A000 959 aa22.49■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Nfe2l3Q9WTM4 660 aa22.49■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Mctp1E9PV86 951 aa22.49■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 TrdnE9Q9K5 693 aa22.49■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Hmx1O70218 332 aa22.49■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Stat1P42225 749 aa22.49■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 CebpzP53569 1052 aaKnown RBP22.49■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Larp1Q6ZQ58 1072 aaKnown RBP22.49■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Ppp1r10Q80W00 888 aaKnown RBP22.49■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Fam13bQ8K2H3 851 aa22.49■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Mdm2P23804 489 aa22.48■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Me3Q8BMF3 604 aa22.48■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Serpina10Q8R121 448 aa22.48■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Bcl2l12Q9D3J3 255 aa22.48■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Fmnl2A2APV2 1086 aa22.47■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 SympkQ80X82 1284 aa22.47■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 ZgpatQ8VDM1 511 aa22.47■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Bicd2Q921C5 820 aa22.47■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Osbpl5Q9ER64 874 aa22.47■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Ppp1r37Q8BKR5 712 aa22.46■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Ubxn4Q8VCH8 506 aa22.46■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Ifi35Q9D8C4 286 aa22.46■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Ddx60E9PZQ1 1711 aa22.46■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Shank2Q80Z38 1476 aa22.46■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Csrnp1P59054 583 aa22.46■■□□□ 1.19
Ccdc50-201ENSMUST00000039443 Cdca8Q8BHX3 289 aa22.45■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 StrbpQ91WM1 672 aaKnown RBP22.45■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 1700113H08RikE9Q9Q5 327 aa22.45■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Ano1Q8BHY3 960 aa22.45■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Nek11Q8C0Q4 628 aa22.45■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Mtmr3Q8K296 1196 aa22.45■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Iffo2Q8R2V2 512 aa22.45■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Ric1Q69ZJ7 1422 aa22.44■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Kiaa0754Q69ZZ9 979 aa22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Polr3gQ6NXY9 223 aa22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Edc3Q8K2D3 508 aaKnown RBP22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Dnaaf4Q8R368 420 aa22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Lmbr1lQ9D1E5 489 aa22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 HdgfP51859 237 aaKnown RBP22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Bcl2l13P59017 434 aa22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Nxf2Q4ZGD8 691 aa22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Zbtb45Q52KG4 520 aa22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Tmem87bQ8BKU8 555 aa22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Tceanc2Q8R2M0 207 aa22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Aox4Q3TYQ9 1336 aa22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 TnrQ8BYI9 1358 aa22.43■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Clec11aO88200 328 aa22.42■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Bach1P97302 739 aa22.42■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Gpatch11Q3UFS4 262 aa22.42■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Smim5Q8BT42 78 aa22.42■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Acsbg1Q99PU5 721 aa22.42■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Ppm1mQ8BU27 406 aa22.42■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Cdhr2E9Q7P9 1308 aa22.41■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Gm21698A0A087WQP8 267 aa22.41■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Gm21671G3UY31 267 aa22.41■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Ets1P27577 440 aa22.41■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Dnajc10Q9DC23 793 aa22.41■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 AceP09470 1312 aa22.41■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Nkx2-3P97334 362 aa22.4■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Tmem109Q3UBX0 243 aa22.4■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Simc1E9Q6E9 1354 aa22.4■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Ctdnep1Q3TP92 244 aa22.4■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Limch1Q3UH68 1057 aa22.4■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Ubash3aQ3V3E1 624 aa22.4■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Nlrp9bQ66X22 1003 aa22.4■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Lrrc59Q922Q8 307 aaKnown RBP22.4■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Pde3aQ9Z0X4 1141 aa22.4■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Slit1Q80TR4 1531 aa22.4■■□□□ 1.18
Ccdc50-201ENSMUST00000039443 Irgm2A0A140LIF8 407 aa22.39■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Cbx1P83917 185 aaKnown RBP22.39■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Dnaaf2Q8BPI1 814 aa22.39■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Stx1aO35526 288 aa22.38■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Card10P58660 1021 aa22.38■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Kank4Q6P9J5 1016 aa22.38■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Zfp317Q8C0Q5 607 aa22.38■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Ccz1Q8C1Y8 480 aa22.38■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Rbbp8nlA2ABX0 614 aa22.38■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Rrp1P56183 494 aaKnown RBP22.38■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Atp2b3Q0VF55 1220 aa22.38■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Smarcc2Q6PDG5 1213 aa22.38■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Dhx30Q99PU8 1217 aaKnown RBP22.38■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Ccdc112A0AUP1 442 aa22.37■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Hook1Q8BIL5 728 aa22.37■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Nrbp1Q99J45 535 aa22.37■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Tlcd1Q99JT6 247 aa22.37■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Syt10Q9R0N4 523 aa22.37■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Zfp91Q62511 572 aa22.36■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Tsen34Q8BMZ5 316 aa22.36■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Ints4Q8CIM8 964 aa22.36■■□□□ 1.17
Ccdc50-201ENSMUST00000039443 Taf3Q5HZG4 932 aa22.36■■□□□ 1.17
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms