RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Dctn1O08788 1281 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Ccnl1Q52KE7 532 aaKnown RBP11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Hand2Q61039 217 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Tsg101Q61187 391 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Cep120Q7TSG1 988 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Ano10Q8BH79 659 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 LarsQ8BMJ2 1178 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Atg4a-psA0A0G2JFS9 396 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Vps37dQ810I0 261 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Slc13a4Q8BZ82 625 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Atg4aQ8C9S8 396 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 WtapQ9ER69 396 aa11.89□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Ktn1Q61595 1327 aaKnown RBP11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Ccdc162pQ0VG85 912 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Tbc1d2bQ3U0J8 965 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Esyt1Q3U7R1 1092 aaKnown RBP11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Commd10Q8JZY2 202 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Igsf1Q7TQA1 1317 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Aifm3Q3TY86 605 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Txndc16Q7TN22 820 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Ano1Q8BHY3 960 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Hs2st1Q8R3H7 356 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Myo3aQ8K3H5 1613 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Sdc2P43407 202 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Znf653Q6YND2 615 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 HellsQ60848 821 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Slc5a4bQ91ZP4 660 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Baiap2l1Q9DBJ3 514 aa11.88□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Prl3d3A0A0M6L0J6 224 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Prl3d2F6R3P9 224 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Ttc14Q9CSP9 761 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Mdm2P23804 489 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Paxbp1P58501 919 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Atp10aO54827 1508 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Depdc5P61460 1591 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Map9Q3TRR0 646 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Kcna6Q61923 529 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Rbm26Q6NZN0 1012 aaKnown RBP11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Ginm1Q91WR6 327 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Cep89Q9CZX2 791 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Phkg2Q9DB30 406 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Knop1Q9Z2Q2 478 aaKnown RBP11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Znf608Q56A10 1511 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Arid4aF8VPQ2 1261 aaKnown RBP11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Idi1P58044 227 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Kmt5bQ3U8K7 883 aa11.87□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Sycp2lA0A0M3U1B0 842 aa11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Tbc1d5Q80XQ2 815 aa11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Rps6kb1Q8BSK8 525 aa11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Q4VA45 678 aa11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 IqcgQ80W32 419 aa11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Ttc5Q99LG4 440 aa11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Adgrl1Q80TR1 1466 aa11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Calm1P0DP26 149 aaKnown RBP11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Calm2P0DP27 149 aaKnown RBP11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Calm3P0DP28 149 aaKnown RBP11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Ncoa4Q5U4H9 625 aa11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 GnaqP21279 359 aa11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Eif4a1P60843 406 aaKnown RBP11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Snx13Q6PHS6 957 aa11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Frmd3Q8BHD4 595 aa11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 MthfsQ9D110 203 aa11.86□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Aox1O54754 1333 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Tyro3P55144 880 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Gdpd2Q9ESM6 539 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Uhrf1bp1lA2RSJ4 1457 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Dennd3A2RT67 1274 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Dnm1P39053 867 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Card10P58660 1021 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Maats1Q8BRC6 783 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Ncaph2Q8BSP2 607 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Gigyf1Q99MR1 1044 aaKnown RBP11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Wdr17E9Q271 1322 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Setd1aE9PYH6 1716 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Slc14a2Q8R4T9 930 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Gm45140A0A0N4SUM8 220 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Ces1aE9PYP1 563 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Eya2O08575 532 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Slc4a4O88343 1079 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Sptlc2P97363 560 aaKnown RBP11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Wdr93Q402B2 695 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Brd3Q8K2F0 726 aaKnown RBP11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Snw1Q9CSN1 536 aaKnown RBP11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 CenphQ9QYM8 241 aa11.85□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Zscan29E9Q5B4 869 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Tceanc2Q8R2M0 207 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Lrrfip2Q91WK0 415 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Uchl5Q9WUP7 329 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Smarcc1P97496 1104 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Hspa4Q61316 841 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 NsmfQ99NF2 532 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Foxp4Q9DBY0 795 aaKnown RBP11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Bin1O08539 588 aaKnown RBP11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Sult6b1P0CC03 303 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Uri1Q3TLD5 531 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Cep135Q6P5D4 1140 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Tmem143Q8VD26 458 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Mlh1Q9JK91 760 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 Slc1a4O35874 532 aa11.84□□□□□ -0.51
Ccdc40-201ENSMUST00000035935 DlatQ8BMF4 642 aa11.84□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 52.7 ms