RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Usp48Q3V0C5 1052 aa15.14■□□□□ 0.01
Rnf4-201ENSMUST00000030992 EappQ5BU09 281 aa15.14■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Leo1Q5XJE5 667 aa15.14■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Kank4Q6P9J5 1016 aa15.14■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Mylk2Q8VCR8 613 aa15.14■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Pard3Q99NH2 1333 aa15.14■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Ddx46Q569Z5 1032 aaKnown RBP15.14■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Rnf214Q8BFU3 668 aaKnown RBP15.14■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Bloc1s2Q9CWG9 143 aa15.14■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Arap2Q8BZ05 1703 aa15.14■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Myd88P22366 296 aa15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 NpeppsQ11011 920 aa15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Ctdnep1Q3TP92 244 aa15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Rrp12Q6P5B0 1295 aaKnown RBP15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Pip4k2bQ80XI4 416 aa15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Tubb6Q922F4 447 aa15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 SrrtQ99MR6 875 aaKnown RBP15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Igbp1bQ9QZ29 343 aa15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Cyp2d10P24456 504 aa15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Wdr24Q8CFJ9 790 aa15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Ciao1Q99KN2 339 aa15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Erich6bQ9D4S6 220 aa15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Nav1Q8CH77 1875 aa15.13■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Ccdc129Q14B48 1034 aa15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Pdcl2Q78Y63 240 aa15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Lrrfip2Q91WK0 415 aa15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Fam213aQ9CYH2 218 aa15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Rrs1Q9CYH6 365 aaKnown RBP15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Brwd3A2AHJ4 1799 aa15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Atp8b3Q6UQ17 1335 aa15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Eya2O08575 532 aa15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Timm10P62073 90 aa15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Gm12185Q5NCB2 835 aa15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Ccdc66Q6NS45 935 aa15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Ppp6r1Q7TSI3 856 aa15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Ptcd1Q8C2E4 695 aaKnown RBP15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Chd1lQ9CXF7 900 aa15.12■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Fam184aE9PW83 1143 aa15.11■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Cers3Q1A3B0 383 aa15.11■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Zfp51Q3U4L8 781 aa15.11■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Samm50Q8BGH2 469 aa15.11■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Cep57l1Q8VDS7 400 aa15.11■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Erc1Q99MI1 1120 aa15.11■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Ppp1r10Q80W00 888 aaKnown RBP15.11■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Me3Q8BMF3 604 aa15.11■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Rrp9Q91WM3 475 aaKnown RBP15.11■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Pus3Q9JI38 481 aa15.11■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Mad1l1Q9WTX8 717 aaKnown RBP15.11■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Asap2Q7SIG6 958 aa15.1■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Casz1Q9CWL2 1761 aa15.1■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Npc1l1Q6T3U4 1333 aa15.1■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Smc4Q8CG47 1286 aa15.1■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Sytl4Q9R0Q1 673 aa15.1■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Slc4a1P04919 929 aa15.1■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Stat1P42225 749 aa15.1■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Casc1Q6TDU8 730 aa15.1■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Golim4Q8BXA1 655 aa15.1■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Nup88Q8CEC0 753 aaKnown RBP15.1■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Acsbg1Q99PU5 721 aa15.1■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Cap2Q9CYT6 476 aa15.1■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Marf1Q8BJ34 1730 aaKnown RBP15.09■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Esyt1Q3U7R1 1092 aaKnown RBP15.09■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Tmem266Q8BZB3 538 aa15.09■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Rdm1Q9CQK3 281 aa15.09■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Ppil4Q9CXG3 492 aaKnown RBP15.09■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Prl7a2O54831 253 aa15.09■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Dnajc5P60904 198 aa15.09■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Babam1Q3UI43 333 aa15.09■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Clcn1Q64347 994 aa15.09■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Krt25Q8VCW2 446 aa15.09■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Akap11E9Q777 1895 aa15.08■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Spata31d1bE9QA57 1361 aa15.08■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Irgm2A0A140LIF8 407 aa15.08■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Gsdma2Q32M21 443 aa15.08■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Mctp2Q5RJH2 878 aa15.08■□□□□ 0.01
Rnf4-201ENSMUST00000030992 Greb1lB9EJV3 1913 aa15.08■□□□□ 0
Rnf4-201ENSMUST00000030992 Ankib1Q6ZPS6 1085 aa15.07■□□□□ 0
Rnf4-201ENSMUST00000030992 Olfml1Q8BSH2 233 aa15.07■□□□□ 0
Rnf4-201ENSMUST00000030992 Klhl34A2AI76 644 aa15.07■□□□□ 0
Rnf4-201ENSMUST00000030992 Exosc10P56960 887 aaKnown RBP15.07■□□□□ 0
Rnf4-201ENSMUST00000030992 Ccnl1Q52KE7 532 aaKnown RBP15.07■□□□□ 0
Rnf4-201ENSMUST00000030992 Smarcc2Q6PDG5 1213 aa15.07■□□□□ 0
Rnf4-201ENSMUST00000030992 Nap1l3Q794H2 544 aa15.07■□□□□ 0
Rnf4-201ENSMUST00000030992 ZwintQ9CQU5 252 aa15.07■□□□□ 0
Rnf4-201ENSMUST00000030992 Nwd2Q6P5U7 1742 aa15.07■□□□□ 0
Rnf4-201ENSMUST00000030992 Anp32cQ64G17 123 aa15.07■□□□□ 0
Rnf4-201ENSMUST00000030992 Ccdc173A0JLY1 547 aa15.06■□□□□ 0
Rnf4-201ENSMUST00000030992 Hspd1P63038 573 aaKnown RBP15.06■□□□□ 0
Rnf4-201ENSMUST00000030992 Pank2Q3U4S0 443 aa15.06■□□□□ 0
Rnf4-201ENSMUST00000030992 Clca2Q8BG22 942 aa15.06■□□□□ 0
Rnf4-201ENSMUST00000030992 Ccdc158Q8CDI6 1109 aa15.06■□□□□ 0
Rnf4-201ENSMUST00000030992 Plcd1Q8R3B1 756 aa15.06■□□□□ 0
Rnf4-201ENSMUST00000030992 Gigyf1Q99MR1 1044 aaKnown RBP15.06■□□□□ 0
Rnf4-201ENSMUST00000030992 Kcnh4A2A5F7 1018 aa15.06■□□□□ 0
Rnf4-201ENSMUST00000030992 Pnma3Q8JZW8 466 aa15.06■□□□□ 0
Rnf4-201ENSMUST00000030992 PdcQ9QW08 244 aa15.06■□□□□ 0
Rnf4-201ENSMUST00000030992 Zbtb22Q9Z0G7 638 aa15.06■□□□□ 0
Rnf4-201ENSMUST00000030992 Cnnm3Q32NY4 713 aa15.05■□□□□ 0
Rnf4-201ENSMUST00000030992 Ttc19Q8CC21 365 aa15.05■□□□□ 0
Rnf4-201ENSMUST00000030992 Chmp3Q9CQ10 224 aa15.05■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 51.3 ms