RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 Polr3dQ91WD1 398 aa12.4□□□□□ -0.42
Ciita-201ENSMUST00000023147 Prrc2bQ7TPM1 1486 aaKnown RBP12.4□□□□□ -0.42
Ciita-201ENSMUST00000023147 SltmQ8CH25 1031 aaKnown RBP12.4□□□□□ -0.42
Ciita-201ENSMUST00000023147 Snw1Q9CSN1 536 aaKnown RBP12.4□□□□□ -0.42
Ciita-201ENSMUST00000023147 Adamts13Q769J6 1426 aa12.4□□□□□ -0.42
Ciita-201ENSMUST00000023147 Neurog2P70447 263 aa12.4□□□□□ -0.42
Ciita-201ENSMUST00000023147 Pdzrn3Q69ZS0 1063 aa12.4□□□□□ -0.42
Ciita-201ENSMUST00000023147 Tshz3Q8CGV9 1081 aa12.4□□□□□ -0.42
Ciita-201ENSMUST00000023147 Hsf2bpQ9D4G2 338 aa12.4□□□□□ -0.42
Ciita-201ENSMUST00000023147 Znf131Q8K3J5 619 aa12.4□□□□□ -0.42
Ciita-201ENSMUST00000023147 Ak9G3UYQ4 1894 aa12.4□□□□□ -0.43
Ciita-201ENSMUST00000023147 Myo3aQ8K3H5 1613 aa12.4□□□□□ -0.43
Ciita-201ENSMUST00000023147 Tyro3P55144 880 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Smarcad1Q04692 1021 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Dmrt2Q8BG36 561 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Gtpbp4Q99ME9 634 aaKnown RBP12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Tmco5aQ9D9D5 303 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Ccdc121E9Q6D3 323 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 CebpzP53569 1052 aaKnown RBP12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Slc7a3P70423 618 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 AidaQ8C4Q6 305 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Serpina10Q8R121 448 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 AdnpQ9Z103 1108 aaKnown RBP12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Rad50P70388 1312 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Tnni2P13412 182 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Maats1Q8BRC6 783 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Ccdc150Q8CDI7 1110 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Eif3bQ8JZQ9 803 aaKnown RBP12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Nos1Q9Z0J4 1429 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 1700006A11RikB9EHI3 544 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Slc26a8Q8R0C3 999 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Bag3Q9JLV1 577 aaKnown RBP12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Zbtb22Q9Z0G7 638 aa12.39□□□□□ -0.43
Ciita-201ENSMUST00000023147 Rad23bP54728 416 aa12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Uri1Q3TLD5 531 aa12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Ccdc93Q7TQK5 629 aa12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Nup133Q8R0G9 1155 aa12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Nlrp3Q8R4B8 1033 aa12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Syt1P46096 421 aa12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Fermt1P59113 677 aa12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Tacc1Q6Y685 774 aa12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Zscan25B2RX31 543 aa12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Stat1P42225 749 aa12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Matr3Q8K310 846 aaKnown RBP12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Esyt1Q3U7R1 1092 aaKnown RBP12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Echdc1Q9D9V3 322 aa12.38□□□□□ -0.43
Ciita-201ENSMUST00000023147 Stk36Q69ZM6 1316 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Adgrl3Q80TS3 1537 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Rims1Q99NE5 1463 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Als2cr12Q8BVM7 383 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Rai14Q9EP71 979 aaKnown RBP12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Epb41l3Q9WV92 929 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Btbd11Q6GQW0 1109 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Rps6ka5Q8C050 863 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Cdan1Q8CC12 1239 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Mrpl44Q9CY73 333 aaKnown RBP12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Riok3Q9DBU3 519 aaKnown RBP12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Mx2Q9WVP9 655 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Prim1P20664 417 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Pank2Q3U4S0 443 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Smc1bQ920F6 1248 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Frmpd2A0A140LI67 1392 aa12.37□□□□□ -0.43
Ciita-201ENSMUST00000023147 Hspa4Q61316 841 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Rapgef3Q8VCC8 918 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Plagl1Q9JLQ4 704 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Astn2Q80Z10 1352 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Pde1cQ64338 706 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Tbc1d31Q6NXY1 996 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Exoc8Q6PGF7 716 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Sdccag8Q80UF4 717 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Lrsam1Q80ZI6 727 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Rnf41Q8BH75 317 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 NapbP28663 298 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Bach2P97303 839 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 E9QMW4 1145 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Mmp8O70138 465 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Tbc1d2bQ3U0J8 965 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Ankib1Q6ZPS6 1085 aa12.36□□□□□ -0.43
Ciita-201ENSMUST00000023147 Gbp1Q01514 589 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Mcm10Q0VBD2 885 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Zfp397Q7TNK4 527 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Usp37Q8C0R0 979 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 ApobrQ8VBT6 942 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Nfxl1E9Q8I7 918 aaKnown RBP12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 LyarQ08288 388 aaKnown RBP12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Slc38a10Q5I012 1090 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Ddx58Q6Q899 926 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Tmc2Q8R4P4 888 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 TchpQ3TVW5 497 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Trim28Q62318 834 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Fkbp5Q64378 456 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Syt10Q9R0N4 523 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Cep55Q8BT07 462 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Taok3Q8BYC6 898 aa12.35□□□□□ -0.43
Ciita-201ENSMUST00000023147 Gm10563F6WIE4 79 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Zranb1Q7M760 708 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 RalylQ8BTF8 293 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Bmp2kQ91Z96 1138 aa12.34□□□□□ -0.43
Ciita-201ENSMUST00000023147 Aox1O54754 1333 aa12.34□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms