RNA–Protein interactions for RNA: ENSMUST00000020034.5

Echdc1-201, Transcript of Ethylmalonyl-CoA decarboxylase, mousemouse

TSL 1 (best) BASIC

Gene Echdc1, Length 3,856 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Echdc1-201ENSMUST00000020034 Luzp1Q8R4U7 1068 aaKnown RBP12.11□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Calcoco2A2A6M5 331 aa12.11□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Gabpb2P81069 414 aa12.11□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Tmem87bQ8BKU8 555 aa12.11□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Ttc27Q8CD92 847 aa12.11□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Dnaaf4Q8R368 420 aa12.11□□□□□ -0.47
Echdc1-201ENSMUST00000020034 LyarQ08288 388 aaKnown RBP12.11□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Lins1Q3U1D0 764 aa12.11□□□□□ -0.47
Echdc1-201ENSMUST00000020034 CenpqQ9CPQ5 267 aa12.11□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Tbc1d7Q9D0K0 293 aa12.11□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Rnf123Q5XPI3 1314 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Gm21663A0A0G2JE01 267 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Ttll7A4Q9F0 912 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Gm7361D3Z6R1 267 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 5031410I06RikE9Q4E0 267 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Gm1979E9QAN3 267 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Gm5862K7N5V5 267 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Gm10220K7N660 267 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Csrnp1P59054 583 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Cplx2P84086 134 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Zfp397Q7TNK4 527 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Fam43aQ8BUP8 424 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Osbpl5Q9ER64 874 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Dmrt2Q8BG36 561 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Pus3Q9JI38 481 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Ino80Q6ZPV2 1559 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Dync1i1O88485 628 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Igflr1Q3U4N7 345 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Gnat3Q3V3I2 354 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 U2af1l4Q8BGJ9 220 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Pcdhb15Q91Y04 786 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Ddx27Q921N6 760 aaKnown RBP12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Speer4bQ9D9F7 267 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Stxbp4Q9WV89 557 aa12.1□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Kansl3A2RSY1 903 aaKnown RBP12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Prpf4bQ61136 1007 aaKnown RBP12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Mns1Q61884 491 aa12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Fsd2Q8BZ52 692 aa12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Rbm17Q8JZX4 405 aaKnown RBP12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Cers3Q1A3B0 383 aa12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Ctdnep1Q3TP92 244 aa12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 4930407I10RikD3Z5T8 1512 aa12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Ccdc102aQ3TMW1 549 aa12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Trim25Q61510 634 aaKnown RBP12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 DbnlQ62418 436 aa12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Ankib1Q6ZPS6 1085 aa12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Dzip1Q8BMD2 852 aa12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Larp6Q8BN59 492 aa12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Zfp317Q8C0Q5 607 aa12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Gnl2Q99LH1 728 aaKnown RBP12.09□□□□□ -0.47
Echdc1-201ENSMUST00000020034 Clec11aO88200 328 aa12.08□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Dnajc2P54103 621 aaKnown RBP12.08□□□□□ -0.48
Echdc1-201ENSMUST00000020034 L1td1Q587J6 782 aaKnown RBP12.08□□□□□ -0.48
Echdc1-201ENSMUST00000020034 CemipQ8BI06 1361 aa12.08□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Snw1Q9CSN1 536 aaKnown RBP12.08□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Mrps25Q9D125 171 aaKnown RBP12.08□□□□□ -0.48
Echdc1-201ENSMUST00000020034 RereQ80TZ9 1558 aa12.08□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Tmc2Q8R4P4 888 aa12.08□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Cdc45Q9Z1X9 566 aa12.08□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Tpm3-rs7D3Z2H9 248 aa12.08□□□□□ -0.48
Echdc1-201ENSMUST00000020034 NefhP19246 1090 aa12.08□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Usp28Q5I043 1051 aa12.08□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Gemin5Q8BX17 1502 aaKnown RBP12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 NktrP30415 1453 aa12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Gsdma2Q32M21 443 aa12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Nxf7Q80SZ6 620 aaKnown RBP12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Cep55Q8BT07 462 aa12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Dis3l2Q8CI75 870 aaKnown RBP12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 StrbpQ91WM1 672 aaKnown RBP12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Ifi35Q9D8C4 286 aa12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Eif5P59325 429 aaKnown RBP12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Gtf2f1Q3THK3 508 aaKnown RBP12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 AceP09470 1312 aa12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Zscan29E9Q5B4 869 aa12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Atp2b1G5E829 1220 aa12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Paxbp1P58501 919 aa12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 HellsQ60848 821 aa12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Ddx58Q6Q899 926 aa12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Odf2lQ9D478 642 aa12.07□□□□□ -0.48
Echdc1-201ENSMUST00000020034 A0A0U1RNP2 1173 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Lrrc8aQ80WG5 810 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 ThemisQ8BGW0 636 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Cdca8Q8BHX3 289 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Vps18Q8R307 973 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Nlrp3Q8R4B8 1033 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Bmp2kQ91Z96 1138 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 PigbQ9JJQ0 542 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Adcy9P51830 1353 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Col1a2Q01149 1372 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Cdk12Q14AX6 1484 aaKnown RBP12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Znf568E9PYI1 671 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Anp32eP97822 260 aaKnown RBP12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Ubxn10Q8BG34 277 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Frat2Q8K025 231 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Flad1Q8R123 492 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Kcnk13Q8R1P5 405 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Pdzd9Q9D9M4 266 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Spag5Q7TME2 1165 aa12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 GphnQ8BUV3 769 aaKnown RBP12.06□□□□□ -0.48
Echdc1-201ENSMUST00000020034 Q8BZJ8 459 aa12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 12.9 ms