RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 RFXAPO00287 272 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 TGM6O95932 706 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 CD79AP11912 226 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 FOXK1P85037 733 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 HNRNPA1L2Q32P51 320 aaKnown RBP17.23■□□□□ 0.35
SCARB2-213ENST00000638680 LIX1LQ8IVB5 337 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 RNF113BQ8IZP6 322 aaKnown RBP17.23■□□□□ 0.35
SCARB2-213ENST00000638680 OR4K15Q8NH41 348 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 ARPC5LQ9BPX5 153 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 NTN4Q9HB63 628 aa17.23■□□□□ 0.35
SCARB2-213ENST00000638680 HIDE1A8MVS5 230 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 MMP2P08253 660 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 CYBAP13498 195 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 CSNK1A1P48729 337 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 CAMK2DQ13557 499 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 HTR4Q13639 388 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 SHISA6Q6ZSJ9 500 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 CADM3Q8N126 398 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 OR9A4Q8NGU2 314 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 ST7LQ8TDW4 575 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 TCEAL2Q9H3H9 227 aaPredicted RBP17.22■□□□□ 0.35
SCARB2-213ENST00000638680 CDH20Q9HBT6 801 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 CLEC2DQ9UHP7 191 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 PIAS3Q9Y6X2 628 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 A6NL46 340 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 ITGB8P26012 769 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 LRRC26Q2I0M4 334 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 KIAA0895LQ68EN5 471 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 Q6ZSR6 202 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 NANOS1Q8WY41 292 aaKnown RBP17.22■□□□□ 0.35
SCARB2-213ENST00000638680 SLC19A3Q9BZV2 496 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 TUBB1Q9H4B7 451 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 EVA1AQ9H8M9 152 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 SOCS6O14544 535 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 ADAMTS4O75173 837 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 UBL3O95164 117 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 FURINP09958 794 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 PVRP15151 417 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 PPT1P50897 306 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 NXNL2Q5VZ03 156 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 MCATQ8IVS2 390 aaKnown RBP17.22■□□□□ 0.35
SCARB2-213ENST00000638680 UBE2FQ969M7 185 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 EMC7Q9NPA0 242 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 H7C1C5 153 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 IDUAP35475 653 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 LCN6P62502 163 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 PLA2G7Q13093 441 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 ESCO2Q56NI9 601 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 PLCXD3Q63HM9 321 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 ISL2Q96A47 359 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 CASD1Q96PB1 797 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 SLC6A20Q9NP91 592 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 ICMTO60725 284 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 ITGB2P05107 769 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 IL1F10Q8WWZ1 152 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 TNFRSF13CQ96RJ3 184 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 IL23AQ9NPF7 189 aa17.22■□□□□ 0.35
SCARB2-213ENST00000638680 HHLA1C9JL84 531 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 K7EPK0 472 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 IMPA1P29218 277 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 CLVS2Q5SYC1 327 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 KDM4DQ6B0I6 523 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 FAM71E2Q8N5Q1 922 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 AMBRA1Q9C0C7 1298 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 TP53TG5Q9Y2B4 290 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 TMEM72A0PK05 275 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 HTR3AP46098 478 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 RPS18P62269 152 aaKnown RBP17.21■□□□□ 0.35
SCARB2-213ENST00000638680 GPLD1P80108 840 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 RTL6Q6ICC9 239 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 FBXW12Q6X9E4 464 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 C20orf85Q9H1P6 137 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 CXorf36Q9H7Y0 433 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 B4DXG7 233 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 EFNA3P52797 238 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 ERV3-1Q14264 604 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 MPP7Q5T2T1 576 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 NOX4Q9NPH5 578 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 ADAM29Q9UKF5 820 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 ZNF593O00488 134 aaPredicted RBP17.21■□□□□ 0.35
SCARB2-213ENST00000638680 GPR75O95800 540 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 CEBPBP17676 345 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 DDOSTP39656 456 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 ZNF169Q14929 603 aaPredicted RBP17.21■□□□□ 0.35
SCARB2-213ENST00000638680 FAM122CQ6P4D5 195 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 CREB3L2Q70SY1 520 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 RBPMSQ93062 196 aaKnown RBP17.21■□□□□ 0.35
SCARB2-213ENST00000638680 SLC39A13Q96H72 371 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 RADILQ96JH8 1075 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 KATNB1Q9BVA0 655 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 NIPAL2Q9H841 368 aa17.21■□□□□ 0.35
SCARB2-213ENST00000638680 CDC14CA4D256 554 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 EDIL3O43854 480 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 PDGFAP04085 211 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 APLNRP35414 380 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 TAS2R46P59540 309 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 RPP30P78346 268 aaKnown RBP17.2■□□□□ 0.34
SCARB2-213ENST00000638680 DSC1Q08554 894 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 IL22RA1Q8N6P7 574 aa17.2■□□□□ 0.34
SCARB2-213ENST00000638680 OR5K2Q8NHB8 316 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms