RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 APOL3O95236 402 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 MSX1P28360 303 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 HTR1FP30939 366 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 NBL1P41271 181 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 PRPS1P60891 318 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 RPS4XP62701 263 aaKnown RBP19.48■□□□□ 0.71
SPAST-204ENST00000621856 DPY19L2P2Q6ZN68 376 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 ANKRD13BQ86YJ7 626 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 ALDH16A1Q8IZ83 802 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 LIPHQ8WWY8 451 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 TAAR8Q969N4 342 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 GPR87Q9BY21 358 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 TMEM72A0PK05 275 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 BLOC1S5-TXNDC5H3BN57 136 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 ATE1O95260 518 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 HIST1H2ABP04908 130 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 PAX7P23759 505 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 PCSK6P29122 969 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 CASP3P42574 277 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 LTBQ06643 244 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 MED22Q15528 200 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 HIST3H2AQ7L7L0 130 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 ADGRG3Q86Y34 549 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 ERI1Q8IV48 349 aaKnown RBP19.48■□□□□ 0.71
SPAST-204ENST00000621856 MOSPD2Q8NHP6 518 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 HIST1H2ACQ93077 130 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 COL25A1Q9BXS0 654 aaPredicted RBP19.48■□□□□ 0.71
SPAST-204ENST00000621856 FGF20Q9NP95 211 aaPredicted RBP19.48■□□□□ 0.71
SPAST-204ENST00000621856 CHRNA9Q9UGM1 479 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 CLEC2DQ9UHP7 191 aa19.48■□□□□ 0.71
SPAST-204ENST00000621856 M0R082 166 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 M0R3G1 203 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 MYL12BO14950 172 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 WISP1O95388 367 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 HSMCR30P0CW71 290 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 PRKCAP17252 672 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 MYL12AP19105 171 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 PAICSP22234 425 aaKnown RBP19.47■□□□□ 0.71
SPAST-204ENST00000621856 NR4A1P22736 598 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 F8A1P23610 371 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 MLF1P58340 268 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 ITGADQ13349 1161 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 CRMP1Q14194 572 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 NIPAL3Q6P499 406 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 SHFQ7M4L6 423 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 NANOGNBQ7Z5D8 188 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 P2RY8Q86VZ1 359 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 TMEM156Q8N614 296 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 FAM98AQ8NCA5 519 aaKnown RBP19.47■□□□□ 0.71
SPAST-204ENST00000621856 MND1Q9BWT6 205 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 NDEL1Q9GZM8 345 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 IRF2BPLQ9H1B7 796 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 FKRPQ9H9S5 495 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 CHCHD3Q9NX63 227 aaKnown RBP19.47■□□□□ 0.71
SPAST-204ENST00000621856 P4HTMQ9NXG6 502 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 KLHL21Q9UJP4 597 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 ZNF229Q9UJW7 825 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 VDAC3Q9Y277 283 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 HIF3AQ9Y2N7 669 aa19.47■□□□□ 0.71
SPAST-204ENST00000621856 TNFSF12-TNFSF13A0A0A6YY99 330 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 ZC3H12DA2A288 527 aaKnown RBP19.46■□□□□ 0.71
SPAST-204ENST00000621856 A8MVM7 634 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 ASAH2BP0C7U1 165 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 CD36P16671 472 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 AQP2P41181 271 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 ZNF41P51814 821 aaPredicted RBP19.46■□□□□ 0.71
SPAST-204ENST00000621856 KLHL12Q53G59 568 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 ARMCX4Q5H9R4 360 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 RNLSQ5VYX0 342 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 SLC16A12Q6ZSM3 486 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 MEPCEQ7L2J0 689 aaKnown RBP19.46■□□□□ 0.71
SPAST-204ENST00000621856 OR52E2Q8NGJ4 325 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 DNAJA3Q96EY1 480 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 OR5M11Q96RB7 305 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 MYCBPQ99417 103 aaPredicted RBP19.46■□□□□ 0.71
SPAST-204ENST00000621856 HRH3Q9Y5N1 445 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 CHCHD2Q9Y6H1 151 aaPredicted RBP19.46■□□□□ 0.71
SPAST-204ENST00000621856 CPAMD8Q8IZJ3 1885 aa19.46■□□□□ 0.71
SPAST-204ENST00000621856 IGLV3-32A0A0A0MS00 114 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 B4DXG7 233 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 STMND1H3BQB6 276 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 BGLAPP02818 100 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 ATP6V1E1P36543 226 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 ERVK-25P63136 954 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 IL10RAQ13651 578 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 ANKDD1AQ495B1 522 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 PRAMEF20Q5VT98 475 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 C1QL3Q5VWW1 255 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 ARSKQ6UWY0 536 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 RAB43Q86YS6 212 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 DND1Q8IYX4 353 aaKnown RBP19.45■□□□□ 0.7
SPAST-204ENST00000621856 CYB561A3Q8NBI2 242 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 SLC37A3Q8NCC5 494 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 OR4K13Q8NH42 304 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 STK35Q8TDR2 534 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 DCUN1D5Q9BTE7 237 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 KATNB1Q9BVA0 655 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 KLHL1Q9NR64 748 aa19.45■□□□□ 0.7
SPAST-204ENST00000621856 EXOSC1Q9Y3B2 195 aaKnown RBP19.45■□□□□ 0.7
SPAST-204ENST00000621856 ADAM18Q9Y3Q7 739 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms