RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 CAV1Q03135 178 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 SLC3A1Q07837 685 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 ZP4Q12836 540 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 BAMBIQ13145 260 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 MOGQ16653 247 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 GSTA3Q16772 222 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 C2orf68Q2NKX9 166 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 TMEM155Q4W5P6 130 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 VAX1Q5SQQ9 334 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.92□□□□□ -1.78
SNCA-213ENST00000618500 DCAF12L2Q5VW00 463 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 ZNF614Q8N883 585 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 OR56A1Q8NGH5 318 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 OR52E4Q8NGH9 312 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 MIPOL1Q8TD10 442 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 HTRA1Q92743 480 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 C3orf49Q96BT1 292 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 TRIM44Q96DX7 344 aaPredicted RBP3.92□□□□□ -1.78
SNCA-213ENST00000618500 CCT7Q99832 543 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 C1orf198Q9H425 327 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 DYNLRB1Q9NP97 96 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 SLC7A10Q9NS82 523 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 OXSMQ9NWU1 459 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 B3GNT2Q9NY97 397 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 UPB1Q9UBR1 384 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 CHRNA9Q9UGM1 479 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 SLC7A8Q9UHI5 535 aa3.92□□□□□ -1.78
SNCA-213ENST00000618500 TCRBV9S1A1TA0A576 114 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 ZNF587BE7ETH6 402 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 CCDC188H7C350 402 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 IFNL4K9M1U5 179 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 SULT2B1O00204 365 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 PPP6CO00743 305 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 ENTPD5O75356 428 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 ESRRBO95718 433 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 AGR2O95994 175 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 NUDT17P0C025 328 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 NTF4P34130 210 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 GPC1P35052 558 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 P2RY4P51582 365 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 DAG1Q14118 895 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 PDCD1Q15116 288 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 DUSP5Q16690 384 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 C11orf88Q6PI97 169 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 Q6ZPA2 131 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 C17orf107Q6ZR85 190 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 PTGR2Q8N8N7 351 aaPredicted RBP3.91□□□□□ -1.78
SNCA-213ENST00000618500 ZIC4Q8N9L1 334 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 OR6S1Q8NH40 331 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 RNF217Q8TC41 542 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 GPR151Q8TDV0 419 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 DDIT4LQ96D03 193 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 ITPKCQ96DU7 683 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 ZNF48Q96MX3 618 aaPredicted RBP3.91□□□□□ -1.78
SNCA-213ENST00000618500 OR5B2Q96R09 309 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 DIRC2Q96SL1 478 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 MRPL57Q9BQC6 102 aaKnown RBP3.91□□□□□ -1.78
SNCA-213ENST00000618500 ACTRT3Q9BYD9 372 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 ATP6V1HQ9UI12 483 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 RASD1Q9Y272 281 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 A0A096LPI6 279 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 TM9SF1O15321 606 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 OIP5O43482 229 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 MFN2O95140 757 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 KNG1P01042 644 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 GPIP06744 558 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 HPGDP15428 266 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 ZNF14P17017 642 aaPredicted RBP3.91□□□□□ -1.78
SNCA-213ENST00000618500 PGM1P36871 562 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 RAG2P55895 527 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 LOXL3P58215 753 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 ACSM2AQ08AH3 577 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 PDIA2Q13087 525 aaKnown RBP3.91□□□□□ -1.78
SNCA-213ENST00000618500 CCNIQ14094 377 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 C11orf91Q3C1V1 193 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 FBXO48Q5FWF7 155 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 TSPO2Q5TGU0 170 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 ACSM2BQ68CK6 577 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 C16orf87Q6PH81 154 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 LRIG3Q6UXM1 1119 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 CASP12Q6UXS9 341 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 SYT10Q6XYQ8 523 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 LDLRAD3Q86YD5 345 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 TREML1Q86YW5 311 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 ALDH16A1Q8IZ83 802 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 UBE2J2Q8N2K1 259 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 COX18Q8N8Q8 333 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 DEFB108BQ8NET1 73 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 OR9K2Q8NGE7 335 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 PIK3R3Q92569 461 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 SLC35B4Q969S0 331 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 TMIGD2Q96BF3 282 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 UPRTQ96BW1 309 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 LRR1Q96L50 414 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 KLHDC3Q9BQ90 382 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 DESI2Q9BSY9 194 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 ANKRA2Q9H9E1 313 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 FN3KRPQ9HA64 309 aa3.91□□□□□ -1.78
SNCA-213ENST00000618500 SIRT3Q9NTG7 399 aaPredicted RBP3.91□□□□□ -1.78
SNCA-213ENST00000618500 TMEM181Q9P2C4 612 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms