RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 LPAR4Q99677 370 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 NXF2Q9GZY0 626 aaKnown RBP15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 ARRDC1-AS1Q9H2J1 176 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 ISG20L2Q9H9L3 353 aaKnown RBP15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 MMP25Q9NPA2 562 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 NANSQ9NR45 359 aa15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 SF3B6Q9Y3B4 125 aaKnown RBP15.8■□□□□ 0.12
PCDHGC3-205ENST00000617641 MPLP40238 635 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 AQP2P41181 271 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 FBXW4P57775 412 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 ERVK-25P63136 954 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 LTBQ06643 244 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 ARMC4Q5T2S8 1044 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZNF322Q6U7Q0 402 aaPredicted RBP15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 SMAP2Q8WU79 429 aaPredicted RBP15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 TM9SF2Q99805 663 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 KATNB1Q9BVA0 655 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 SLC26A1Q9H2B4 701 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 RXFP3Q9NSD7 469 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 TXNL4BQ9NX01 149 aaKnown RBP15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 PPIEQ9UNP9 301 aaKnown RBP15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 A0A0C4DFX4 3053 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 TMEM200CA6NKL6 621 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZNF670-ZNF695F2Z2N8 137 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 ADAM10O14672 748 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 RPS19P39019 145 aaKnown RBP15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 TRA2AQ13595 282 aaKnown RBP eCLIP15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 MRPL14Q6P1L8 145 aaKnown RBP15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 BPHLQ86WA6 291 aaPredicted RBP15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 DUSP19Q8WTR2 217 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 RASD2Q96D21 266 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 DNAJA3Q96EY1 480 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 TIMP4Q99727 224 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 ALG8Q9BVK2 526 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 ADGRL4Q9HBW9 690 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 NRIP3Q9NQ35 241 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 KLHL21Q9UJP4 597 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 PCNX3Q9H6A9 2034 aa15.79■□□□□ 0.12
PCDHGC3-205ENST00000617641 DAPL1A0PJW8 107 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 IMPA2O14732 288 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 IGF2P01344 180 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 PGCP20142 388 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 PRPS1P60891 318 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 TMED1Q13445 227 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 C22orf42Q6IC83 251 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 TMEM205Q6UW68 189 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 KLBQ86Z14 1044 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 OR51L1Q8NGJ5 315 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 NUBPLQ8TB37 319 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 FNDC8Q8TC99 324 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 TAAR8Q969N4 342 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 C1GALT1C1Q96EU7 318 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 C12orf10Q9HB07 376 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 PALMDQ9NP74 551 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 CAB39Q9Y376 341 aaPredicted RBP15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 A3GALT2U3KPV4 340 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 BDP1A6H8Y1 2624 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 WDFY3Q8IZQ1 3526 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 hCG_2014768A0A024R1R8 64 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 HTR3EA5X5Y0 456 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 C2orf72A6NCS6 295 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 AKAP8O43823 692 aaKnown RBP15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 SERPINI2O75830 405 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 LDOC1O95751 146 aaPredicted RBP15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 SBK2P0C263 348 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 GP1BBP13224 206 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 CXCR1P25024 350 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 SOX6P35712 828 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 RPS5P46782 204 aaKnown RBP15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 P2RX1P51575 399 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 CBFBQ13951 182 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZPLD1Q8TCW7 415 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 LIPHQ8WWY8 451 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 NMNAT3Q96T66 252 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 HIF3AQ9Y2N7 669 aa15.78■□□□□ 0.12
PCDHGC3-205ENST00000617641 EXPH5Q8NEV8 1989 aa15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 ASAH2BP0C7U1 165 aa15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 CELP19835 753 aa15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 SLC26A5P58743 744 aa15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 PSPHP78330 225 aa15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 QPRTQ15274 297 aa15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 CRTC2Q53ET0 693 aaPredicted RBP15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 OR5M10Q6IEU7 315 aa15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 TMPRSS11AQ6ZMR5 421 aa15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 SNX29P2Q8IUI4 249 aa15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 NPEPL1Q8NDH3 523 aa15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 ZMYND19Q96E35 227 aaPredicted RBP15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 GPX7Q96SL4 187 aaPredicted RBP15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 SNTG1Q9NSN8 517 aa15.77■□□□□ 0.12
PCDHGC3-205ENST00000617641 TEX51A0A1B0GUA7 166 aa15.77■□□□□ 0.11
PCDHGC3-205ENST00000617641 C4orf47A7E2U8 309 aa15.77■□□□□ 0.11
PCDHGC3-205ENST00000617641 SLC30A4O14863 429 aa15.77■□□□□ 0.11
PCDHGC3-205ENST00000617641 ARPC3O15145 178 aa15.77■□□□□ 0.11
PCDHGC3-205ENST00000617641 GABRA5P31644 462 aa15.77■□□□□ 0.11
PCDHGC3-205ENST00000617641 FABP5Q01469 135 aa15.77■□□□□ 0.11
PCDHGC3-205ENST00000617641 ACSM1Q08AH1 577 aa15.77■□□□□ 0.11
PCDHGC3-205ENST00000617641 EFR3AQ14156 821 aa15.77■□□□□ 0.11
PCDHGC3-205ENST00000617641 GALEQ14376 348 aa15.77■□□□□ 0.11
PCDHGC3-205ENST00000617641 C1QL3Q5VWW1 255 aa15.77■□□□□ 0.11
PCDHGC3-205ENST00000617641 B4GALNT2Q8NHY0 566 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms