RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 TTKP33981 857 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 CASRP41180 1078 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 APOBEC1P41238 236 aaKnown RBP13.75□□□□□ -0.21
VRK3-207ENST00000594092 MASP1P48740 699 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 NUDT6P53370 316 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 CDC20Q12834 499 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 SNAPC1Q16533 368 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 ZNF74Q16587 644 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 ZBED5Q49AG3 693 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 TMEM201Q5SNT2 666 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 TIGD3Q6B0B8 471 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 BORAQ6PGQ7 559 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 SMARCD3Q6STE5 483 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 PRSS48Q7RTY5 328 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 SVOPQ8N4V2 548 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 LRRC17Q8N6Y2 441 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 OR2T33Q8NG76 320 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 OR4Q3Q8NH05 313 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 OR51A7Q8NH64 312 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 POC1BQ8TC44 478 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 TMIGD2Q96BF3 282 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 KTI12Q96EK9 354 aaPredicted RBP13.75□□□□□ -0.21
VRK3-207ENST00000594092 TNFRSF13CQ96RJ3 184 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 TUBA1CQ9BQE3 449 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 UTP23Q9BRU9 249 aaKnown RBP13.75□□□□□ -0.21
VRK3-207ENST00000594092 RHNO1Q9BSD3 238 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 COPS4Q9BT78 406 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 ENKD1Q9H0I2 346 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 GPR83Q9NYM4 423 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 POLHQ9Y253 713 aa13.75□□□□□ -0.21
VRK3-207ENST00000594092 ZC3H12DA2A288 527 aaKnown RBP13.74□□□□□ -0.21
VRK3-207ENST00000594092 SHISA8B8ZZ34 492 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 TLX3O43711 291 aaPredicted RBP13.74□□□□□ -0.21
VRK3-207ENST00000594092 PRKYO43930 277 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 HCN1O60741 890 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 NPIPB7O75200 414 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 SLC25A12O75746 678 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 NEURL1O76050 574 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 SLC9A3P48764 834 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 DNASE1L1P49184 302 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 LTBQ06643 244 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 PMS2P3Q13401 168 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 OCLNQ16625 522 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 MEDAGQ5VYS4 303 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 XAF1Q6GPH4 301 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 SPINK14Q6IE38 97 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 THSD4Q6ZMP0 1018 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 OR1J4Q8NGS1 313 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 KCNE4Q8WWG9 221 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 LIPHQ8WWY8 451 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 GGHQ92820 318 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 TAAR8Q969N4 342 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 DGCR14Q96DF8 476 aaKnown RBP13.74□□□□□ -0.21
VRK3-207ENST00000594092 MRGPRX4Q96LA9 322 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 JSRP1Q96MG2 331 aaPredicted RBP13.74□□□□□ -0.21
VRK3-207ENST00000594092 GNRHR2Q96P88 292 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 MOGAT1Q96PD6 335 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 SIGLEC12Q96PQ1 595 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 MCCC2Q9HCC0 563 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 AMBNQ9NP70 447 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 TIMMDC1Q9NPL8 285 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 PLA2G3Q9NZ20 509 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 ZNF337Q9Y3M9 751 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 PCDHGB1Q9Y5G3 927 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 TRAV36DV7A0A075B6V5 113 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 A8MVM7 634 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 FAM47E-STBD1D6RA91 191 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 EFSO43281 561 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 TLX2O43763 284 aaPredicted RBP13.74□□□□□ -0.21
VRK3-207ENST00000594092 ENTPD6O75354 484 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 RAB39AQ14964 217 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 PGGHGQ32M88 737 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 SLC25A30Q5SVS4 291 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 AGAP7PQ5VUJ5 663 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 C1QL3Q5VWW1 255 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 FAM26EQ8N5C1 309 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 C10orf53Q8N6V4 93 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 STK35Q8TDR2 534 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 AGAP4Q96P64 663 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 RBM38Q9H0Z9 239 aaKnown RBP13.74□□□□□ -0.21
VRK3-207ENST00000594092 UBQLN3Q9H347 655 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 DEPPQ9NTK1 212 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 FKBP14Q9NWM8 211 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 CNOT2Q9NZN8 540 aaKnown RBP13.74□□□□□ -0.21
VRK3-207ENST00000594092 DNAJC27Q9NZQ0 273 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 CHRNA9Q9UGM1 479 aa13.74□□□□□ -0.21
VRK3-207ENST00000594092 A0A087WZY1 265 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 EFCAB10A6NFE3 127 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 EFNA2O43921 213 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 BGLAPP02818 100 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 MT-ND2P03891 347 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 HMGN1P05114 100 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 PCMT1P22061 227 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 TCEA1P23193 301 aaKnown RBP13.73□□□□□ -0.21
VRK3-207ENST00000594092 RPS5P46782 204 aaKnown RBP13.73□□□□□ -0.21
VRK3-207ENST00000594092 FOXK1P85037 733 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 MVKQ03426 396 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 EMX1Q04741 257 aaPredicted RBP13.73□□□□□ -0.21
VRK3-207ENST00000594092 OR1C1Q15619 314 aa13.73□□□□□ -0.21
VRK3-207ENST00000594092 C1orf140Q5VVS0 124 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms