RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 LSM12Q3MHD2 195 aaKnown RBP18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 LIPMQ5VYY2 423 aa18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 C8orf74Q6P047 294 aa18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 FRMD7Q6ZUT3 714 aa18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 C16orf62Q7Z3J2 963 aa18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 GPAT4Q86UL3 456 aa18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 CDK20Q8IZL9 346 aa18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 NUP37Q8NFH4 326 aa18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 MRPL24Q96A35 216 aaKnown RBP18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 ZNF747Q9BV97 191 aa18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 KCNF1Q9H3M0 494 aa18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 ZNF442Q9H7R0 627 aa18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 KCNE5Q9UJ90 142 aa18.84■□□□□ 0.61
CAPNS1-205ENST00000588780 LOC105371242A0A075B767 164 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 SCAMP2O15127 329 aaKnown RBP18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 FCMRO60667 390 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 UGT2B17O75795 530 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 LINC00032P0C843 101 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 LAMP1P11279 417 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 NEFHP12036 1026 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 RPL3P39023 403 aaKnown RBP18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 NAA20P61599 178 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 H3F3AP84243 136 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 OTUD3Q5T2D3 398 aaPredicted RBP18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 TREML4Q6UXN2 200 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 TIFABQ6ZNK6 161 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 ADGRG3Q86Y34 549 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 BPIFB2Q8N4F0 458 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 OR2T11Q8NH01 316 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 TMEM45BQ96B21 275 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 MOAP1Q96BY2 351 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 SEC61A2Q9H9S3 476 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 PCDHGB4Q9UN71 923 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 TMED5Q9Y3A6 229 aa18.83■□□□□ 0.6
CAPNS1-205ENST00000588780 TMED7-TICAM2A0A0A6YYA0 188 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 CHEK2O96017 543 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 PNPP00491 289 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 AK1P00568 194 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 TFP02787 698 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 BCKDHAP12694 445 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 MATN1P21941 496 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 IDH2P48735 452 aaKnown RBP18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 ARFIP2P53365 341 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 HGFACQ04756 655 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 ZNF311Q5JNZ3 666 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 RELL1Q8IUW5 271 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 OR9K2Q8NGE7 335 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 SFXN5Q8TD22 340 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 FCRL1Q96LA6 429 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 ZNF385AQ96PM9 386 aaKnown RBP18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 ALKBH3Q96Q83 286 aaPredicted RBP18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 SLC6A7Q99884 636 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 TSPYL1Q9H0U9 437 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 ATAD3AQ9NVI7 634 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 ATP6V1HQ9UI12 483 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 SLC35A3Q9Y2D2 325 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 TMED7Q9Y3B3 224 aa18.82■□□□□ 0.6
CAPNS1-205ENST00000588780 DUXAA6NLW8 204 aa18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 TMEM114B3SHH9 223 aa18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 GAAP10253 952 aa18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 FOXL1Q12952 345 aa18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 NPRL3Q12980 569 aa18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 PDCD2Q16342 344 aaPredicted RBP18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 FAM153CQ494X1 144 aa18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 PAQR6Q6TCH4 344 aa18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 ZYG11AQ6WRX3 759 aa18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 CARM1Q86X55 608 aa18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 DDIASQ8IXT1 998 aa18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 ARFGAP2Q8N6H7 521 aa18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 PMM1Q92871 262 aa18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 MOV10Q9HCE1 1003 aaKnown RBP18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 DDX28Q9NUL7 540 aaKnown RBP18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 NUP214P35658 2090 aaPredicted RBP18.81■□□□□ 0.6
CAPNS1-205ENST00000588780 TRAV20A0A0B4J274 112 aa18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 TMEM129A0AVI4 362 aa18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 AZIN1O14977 448 aa18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 CELA3BP08861 270 aa18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 IMPDH2P12268 514 aa18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 TCN1P20061 433 aaPredicted RBP18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 PGM1P36871 562 aa18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 HTR3AP46098 478 aa18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 SNTB2Q13425 540 aaKnown RBP18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 LSRQ86X29 649 aaPredicted RBP18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 CCDC63Q8NA47 563 aa18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 BCL2L2Q92843 193 aaPredicted RBP18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 EXD2Q9NVH0 621 aa18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 CRNNQ9UBG3 495 aaPredicted RBP18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 DCDC2Q9UHG0 476 aa18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 CMAHPQ9Y471 501 aa18.8■□□□□ 0.6
CAPNS1-205ENST00000588780 ARPC4-TTLL3A0A0A6YYG9 625 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 TMEM72A0PK05 275 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 G3V2L1 256 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 PPIHO43447 177 aaKnown RBP18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 SCN2BO60939 215 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 BCAS1O75363 584 aaPredicted RBP18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 URI1O94763 535 aaPredicted RBP18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 AKR7A3O95154 331 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 MAPK1P28482 360 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 DAG1Q14118 895 aa18.79■□□□□ 0.6
CAPNS1-205ENST00000588780 MAPK14Q16539 360 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms