RNA–Protein interactions for RNA: ENST00000583438.1

PPP4R1-225, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-225ENST00000583438 TDRPQ86YL5 185 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 CMTM4Q8IZR5 234 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 CLEC4FQ8N1N0 589 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 OR52N5Q8NH56 324 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 ZFP90Q8TF47 636 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 MSI2Q96DH6 328 aaKnown RBP6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 TRMT61AQ96FX7 289 aaKnown RBP6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 MS4A4EQ96PG1 132 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 C1QTNF6Q9BXI9 259 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 ESRP2Q9H6T0 727 aaKnown RBP6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 GRPEL1Q9HAV7 217 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 MIEF1Q9NQG6 463 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 GLRX2Q9NS18 164 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 GIMAP4Q9NUV9 329 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 GRID1Q9ULK0 1009 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 SLC25A15Q9Y619 301 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 MGAM2Q2M2H8 2515 aa6.88□□□□□ -1.31
PPP4R1-225ENST00000583438 TGP01266 2768 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 A0A1W2PQD3 144 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 CCDC154A6NI56 674 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 OR5H1A6NKK0 313 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 PDLIM1O00151 329 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 KCNAB3O43448 404 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 RGS14O43566 566 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 CYTIPO60759 359 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 RSL1D1O76021 490 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 SLU7O95391 586 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 PLATP00750 562 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 HMGN2P05204 90 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 YES1P07947 543 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 PRPH2P23942 346 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 SERPINB9P50453 376 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 ZNF83P51522 516 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 ZNF41P51814 821 aaPredicted RBP6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 NUDT6P53370 316 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 PKNOX1P55347 436 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 PSPHP78330 225 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 LGALS3BPQ08380 585 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 FUT5Q11128 374 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 MAPK14Q16539 360 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 C3orf36Q3SXR2 165 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 FAM153CQ494X1 144 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 ATP6AP1LQ52LC2 224 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 SLC25A53Q5H9E4 307 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 CDC73Q6P1J9 531 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 MYPOPQ86VE0 399 aaPredicted RBP6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 SAMD14Q8IZD0 417 aaPredicted RBP6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 MIER2Q8N344 545 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 CDRT4Q8N9R6 151 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 OR7A2PQ8NGA2 310 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 OR52E4Q8NGH9 312 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 OR5D16Q8NGK9 328 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 HSD17B8Q92506 261 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 CPNE4Q96A23 557 aaPredicted RBP6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 ARL5BQ96KC2 179 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 HS6ST2Q96MM7 605 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 SORCS2Q96PQ0 1159 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 TXLNGYQ9BZA5 131 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 EML4Q9HC35 981 aaKnown RBP6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 NMRK1Q9NWW6 199 aa6.87□□□□□ -1.31
PPP4R1-225ENST00000583438 UBE2QL1A1L167 161 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 CLDN24A6NM45 220 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 LSM1O15116 133 aaKnown RBP6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 FCMRO60667 390 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 TBX19O60806 448 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 FESP07332 822 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 CHRNGP07510 517 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 SNRPAP09012 282 aaKnown RBP6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 LAMP1P11279 417 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 ELK4P28324 431 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 ASMTP46597 345 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 SLC6A9P48067 706 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 SKP2Q13309 424 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 QPRTQ15274 297 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 RNPS1Q15287 305 aaKnown RBP6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 ZNHIT3Q15649 155 aaPredicted RBP6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 UGT3A2Q3SY77 523 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 FAM120AOSQ5T036 256 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 PDZK1Q5T2W1 519 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 C9orf135Q5VTT2 229 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 LIPMQ5VYY2 423 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 C8orf74Q6P047 294 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 LRIG3Q6UXM1 1119 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 ZYG11AQ6WRX3 759 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 IKBIPQ70UQ0 350 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 SZRD1Q7Z422 152 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 GSPT2Q8IYD1 628 aaKnown RBP6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 CCNYL1Q8N7R7 359 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 COX18Q8N8Q8 333 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 OR5AK3PQ8NH89 298 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 ZNF764Q96H86 408 aaPredicted RBP6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 C20orf173Q96LM9 149 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 C3orf30Q96M34 536 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 SSBP3Q9BWW4 388 aaPredicted RBP6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 OR11A1Q9GZK7 315 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 REEP4Q9H6H4 257 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 CHODLQ9H9P2 273 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 UBQLN4Q9NRR5 601 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 CBLN4Q9NTU7 201 aa6.86□□□□□ -1.31
PPP4R1-225ENST00000583438 TMEM160Q9NX00 188 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms