RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 FANCFQ9NPI8 374 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 EMC3Q9P0I2 261 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 CD300AQ9UGN4 299 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 FOXD3Q9UJU5 478 aaPredicted RBP11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 PACSIN3Q9UKS6 424 aa11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 PRPF19Q9UMS4 504 aaKnown RBP11.42□□□□□ -0.58
TRAPPC1-206ENST00000573989 PTPN13Q12923 2485 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 A0A087WUJ7 227 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 NKX2-6A6NCS4 301 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 TMEM229AB2RXF0 380 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 EEF1E1-BLOC1S5C9J1V9 151 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 EEF1E1O43324 174 aaKnown RBP11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 SS18L1O75177 396 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 ATP5HO75947 161 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 UBOX5O94941 541 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 CLDN1O95832 211 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 IFNW1P05000 195 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 T-ENOLP0DO92 83 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 NCK1P16333 377 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 CPOXP36551 454 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 PEX19P40855 299 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 AGFG1P52594 562 aaKnown RBP11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 CDH12P55289 794 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 RASGEF1BQ0VAM2 473 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 FOXF2Q12947 444 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 MFSD13AQ14CX5 517 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 NPTX1Q15818 432 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 DNAL1Q4LDG9 190 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 IFI44LQ53G44 452 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 DEF8Q6ZN54 512 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 RINLQ6ZS11 566 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 STK32CQ86UX6 486 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 OR6K3Q8NGY3 331 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 NSMCE2Q96MF7 247 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 PRR14Q9BWN1 585 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 UCK2Q9BZX2 261 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 MUC13Q9H3R2 512 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 SLC24A3Q9HC58 644 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 GMPR2Q9P2T1 348 aaKnown RBP11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 PROCRQ9UNN8 238 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 SNX13Q9Y5W8 968 aa11.41□□□□□ -0.58
TRAPPC1-206ENST00000573989 TRAV36DV7A0A075B6V5 113 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 IGHV3-15A0A0B4J1V0 119 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 ZC3H12DA2A288 527 aaKnown RBP11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 LIPT2A6NK58 231 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 GPR171O14626 319 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 MSTNO14793 375 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 SMAD9O15198 467 aaKnown RBP11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 GYG2O15488 501 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 TPST2O60704 377 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 CYTIPO60759 359 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 SMNDC1O75940 238 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 OR5F1O95221 314 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 YES1P07947 543 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 THRBP10828 461 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 IMPDH2P12268 514 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 FPR1P21462 350 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 OR1E2P47887 323 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 SIRPAP78324 504 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 CEACAM7Q14002 265 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 PDK3Q15120 406 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 OR7A5Q15622 319 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 FXNQ16595 210 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 FAM69AQ5T7M9 428 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 TTC33Q6PID6 262 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 PAQR6Q6TCH4 344 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 CYP4Z1Q86W10 505 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 KIF18BQ86Y91 864 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 RBM45Q8IUH3 476 aaKnown RBP11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 LIX1LQ8IVB5 337 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 RELL2Q8NC24 303 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 FAM156AQ8NDB6 213 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 MFSD8Q8NHS3 518 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 ABHD3Q8WU67 409 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 POP5Q969H6 163 aaKnown RBP11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 SLC41A3Q96GZ6 507 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 HSH2DQ96JZ2 352 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 WFDC6Q9BQY6 131 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 TMEM43Q9BTV4 400 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 DCAF13Q9NV06 445 aaKnown RBP11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 TAS2R1Q9NYW7 299 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 C6orf203Q9P0P8 240 aaPredicted RBP11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 KLHL13Q9P2N7 655 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 SLC7A7Q9UM01 511 aa11.4□□□□□ -0.58
TRAPPC1-206ENST00000573989 ZNF724A8MTY0 619 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 NPIPB7O75200 414 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 TNFSF13O75888 250 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 VAMP5O95183 116 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 CD8BP10966 210 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 TNFRSF1BP20333 461 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 KIR2DL2P43627 348 aaPredicted RBP11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 RPS5P46782 204 aaKnown RBP11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 EGR4Q05215 589 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 ST3GAL3Q11203 375 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 GUSBP1Q15486 140 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 CDSNQ15517 529 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 FBXL19-AS1Q494R0 122 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 MTX3Q5HYI7 312 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 VTCN1Q7Z7D3 282 aa11.39□□□□□ -0.59
TRAPPC1-206ENST00000573989 OR4D11Q8NGI4 311 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms