RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 ZNF83P51522 516 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 AQP5P55064 265 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 ATP5J2P56134 94 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 H3F3AP84243 136 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 SPOCK1Q08629 439 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 PDK3Q15120 406 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 RGNQ15493 299 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 ZNF672Q499Z4 452 aaPredicted RBP12.12□□□□□ -0.47
RAB40B-204ENST00000571554 OTUD3Q5T2D3 398 aaPredicted RBP12.12□□□□□ -0.47
RAB40B-204ENST00000571554 FUNDC1Q8IVP5 155 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 MSRB3Q8IXL7 192 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 ZNF440Q8IYI8 595 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 C10orf111Q8N326 155 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 MUCL1Q96DR8 90 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 COX4I2Q96KJ9 171 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 NAA11Q9BSU3 229 aaPredicted RBP12.12□□□□□ -0.47
RAB40B-204ENST00000571554 C1QTNF6Q9BXI9 259 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 ADAM19Q9H013 955 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 ADPRHL2Q9NX46 363 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 SLC25A37Q9NYZ2 338 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 TRAPPC4Q9Y296 219 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 MAGED1Q9Y5V3 778 aaPredicted RBP12.12□□□□□ -0.47
RAB40B-204ENST00000571554 FLVCR1Q9Y5Y0 555 aa12.12□□□□□ -0.47
RAB40B-204ENST00000571554 A0A0G2JPF8 293 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 A0A1W2PP18 115 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 LIPT2A6NK58 231 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 OR5H1A6NKK0 313 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 HNRNPCL2B2RXH8 293 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 HNRNPCL3B7ZW38 293 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 GPR171O14626 319 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 ABCD4O14678 606 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 DNPH1O43598 174 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 HNRNPCL1O60812 293 aaKnown RBP12.11□□□□□ -0.47
RAB40B-204ENST00000571554 ITGA5P08648 1049 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 HNRNPCL4P0DMR1 293 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 HOXB9P17482 250 aaPredicted RBP12.11□□□□□ -0.47
RAB40B-204ENST00000571554 FKBP2P26885 142 aaKnown RBP12.11□□□□□ -0.47
RAB40B-204ENST00000571554 SLC16A1P53985 500 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 COPZ1P61923 177 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 RPS4XP62701 263 aaKnown RBP12.11□□□□□ -0.47
RAB40B-204ENST00000571554 LARS2Q15031 903 aaKnown RBP12.11□□□□□ -0.47
RAB40B-204ENST00000571554 ZNF311Q5JNZ3 666 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 PAGE3Q5JUK9 113 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 TIMM23BQ5SRD1 257 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 TSPO2Q5TGU0 170 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 RNF220Q5VTB9 566 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 WBP2NLQ6ICG8 309 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 GPAT4Q86UL3 456 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 PIAS4Q8N2W9 510 aaPredicted RBP12.11□□□□□ -0.47
RAB40B-204ENST00000571554 GOLGA6L1Q8N7Z2 621 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 NFKBIDQ8NI38 313 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 SMAP2Q8WU79 429 aaPredicted RBP12.11□□□□□ -0.47
RAB40B-204ENST00000571554 PMM1Q92871 262 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 SPDL1Q96EA4 605 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 ZNF385AQ96PM9 386 aaKnown RBP12.11□□□□□ -0.47
RAB40B-204ENST00000571554 SPATA9Q9BWV2 254 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 RSPO3Q9BXY4 272 aaPredicted RBP12.11□□□□□ -0.47
RAB40B-204ENST00000571554 TRIM2Q9C040 744 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 CACYBPQ9HB71 228 aaKnown RBP12.11□□□□□ -0.47
RAB40B-204ENST00000571554 SLC7A10Q9NS82 523 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 ASB6Q9NWX5 421 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 UPB1Q9UBR1 384 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 ZNF232Q9UNY5 417 aa12.11□□□□□ -0.47
RAB40B-204ENST00000571554 A0A096LPI6 279 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 SHISA9B4DS77 424 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 C5orf58C9J3I9 102 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 M0R1B8 84 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 EIF1BO60739 113 aaKnown RBP12.1□□□□□ -0.47
RAB40B-204ENST00000571554 PGM3O95394 542 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 GPIP06744 558 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 THBS1P07996 1170 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 DANCRP0C864 163 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 CDH2P19022 906 aaPredicted RBP12.1□□□□□ -0.47
RAB40B-204ENST00000571554 CDH11P55287 796 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 LGALS3BPQ08380 585 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 SLC17A1Q14916 467 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 PGGHGQ32M88 737 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 AGKQ53H12 422 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 BLOC1S3Q6QNY0 202 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 PAQR6Q6TCH4 344 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 PRSS57Q6UWY2 283 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 COMTD1Q86VU5 262 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 MAPK1IP1LQ8NDC0 245 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 GTPBP3Q969Y2 492 aaKnown RBP12.1□□□□□ -0.47
RAB40B-204ENST00000571554 C3orf49Q96BT1 292 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 BDH2Q9BUT1 245 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 A4GALTQ9NPC4 353 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 ZNF701Q9NV72 531 aaPredicted RBP12.1□□□□□ -0.47
RAB40B-204ENST00000571554 TAS2R16Q9NYV7 291 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 MALT1Q9UDY8 824 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 SLC9A8Q9Y2E8 581 aa12.1□□□□□ -0.47
RAB40B-204ENST00000571554 ZANQ9Y493 2812 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 NDUFS7O75251 213 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 TGDSO95455 350 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 HEXAP06865 529 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 GABRA6Q16445 453 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 GCNT6Q5T4J0 391 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 C1orf140Q5VVS0 124 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 AAED1Q7RTV5 226 aa12.09□□□□□ -0.47
RAB40B-204ENST00000571554 ZIC4Q8N9L1 334 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms