RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 Q96MF0 132 aa10.93□□□□□ -0.66
CTDNEP1-205ENST00000570828 C7orf26Q96N11 449 aa10.93□□□□□ -0.66
CTDNEP1-205ENST00000570828 RAD21L1Q9H4I0 556 aa10.93□□□□□ -0.66
CTDNEP1-205ENST00000570828 TCF7L2Q9NQB0 619 aa10.93□□□□□ -0.66
CTDNEP1-205ENST00000570828 RLIMQ9NVW2 624 aa10.93□□□□□ -0.66
CTDNEP1-205ENST00000570828 TRAPPC4Q9Y296 219 aa10.93□□□□□ -0.66
CTDNEP1-205ENST00000570828 ZNF443Q9Y2A4 671 aaPredicted RBP10.93□□□□□ -0.66
CTDNEP1-205ENST00000570828 ROS1P08922 2347 aa10.93□□□□□ -0.66
CTDNEP1-205ENST00000570828 TMEM72A0PK05 275 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 H7C1Q1 480 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 MRPL33O75394 65 aaKnown RBP10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 TGDSO95455 350 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 THBS1P07996 1170 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 TFPTP0C1Z6 253 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 IGHV1-2P23083 117 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 CXCR1P25024 350 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 RPS4XP62701 263 aaKnown RBP10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 BSPH1Q075Z2 132 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 MAPK11Q15759 364 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 ZSWIM7Q19AV6 140 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 RPS26P11Q5JNZ5 115 aaPredicted RBP10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 TIMM23BQ5SRD1 257 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 RNF220Q5VTB9 566 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 ADAM5Q6NVV9 412 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 EPGNQ6UW88 154 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 CLEC9AQ6UXN8 241 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 CASP12Q6UXS9 341 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 P2RY8Q86VZ1 359 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 VRK2Q86Y07 508 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 CCDC103Q8IW40 242 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 CADM2Q8N3J6 435 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 SLC38A5Q8WUX1 472 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 FBXW5Q969U6 566 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 TMEM19Q96HH6 336 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 COX4I2Q96KJ9 171 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 SMR3AQ99954 134 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 NAA11Q9BSU3 229 aaPredicted RBP10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 BDH2Q9BUT1 245 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 ARMC7Q9H6L4 198 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 ASB6Q9NWX5 421 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 LAMP3Q9UQV4 416 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 SLC9A8Q9Y2E8 581 aa10.92□□□□□ -0.66
CTDNEP1-205ENST00000570828 A0A0G2JPF8 293 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 CIB4A0PJX0 185 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 OR5H1A6NKK0 313 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 CCT8L1PA6NM43 557 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 HNRNPCL2B2RXH8 293 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 HNRNPCL3B7ZW38 293 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 NR5A2O00482 541 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 TPD52L2O43399 206 aaKnown RBP10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 HNRNPCL1O60812 293 aaKnown RBP10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 RAMP1O60894 148 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 RAD51DO75771 328 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 GKN3PP0CG01 181 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 HNRNPCL4P0DMR1 293 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 PAX1P15863 534 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 NCF2P19878 526 aaPredicted RBP10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 IDUAP35475 653 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 ATP5J2P56134 94 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 H3F3AP84243 136 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 FADDQ13158 208 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 WBP2NLQ6ICG8 309 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 SLC2A7Q6PXP3 512 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 PAQR6Q6TCH4 344 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 SEZ6L2Q6UXD5 910 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 ATG4DQ86TL0 474 aaPredicted RBP10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 ZNF433Q8N7K0 673 aaPredicted RBP10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 GOLGA6L1Q8N7Z2 621 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 KBTBD8Q8NFY9 601 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 DYDC1Q8WWB3 177 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 IGFBPL1Q8WX77 278 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 GTF2H4Q92759 462 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 ATP6V1G3Q96LB4 118 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 SLCO1B3Q9NPD5 702 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 ZNF701Q9NV72 531 aaPredicted RBP10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 TAS2R16Q9NYV7 291 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 MALT1Q9UDY8 824 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 PRDM4Q9UKN5 801 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 ZNF232Q9UNY5 417 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 PCDHB14Q9Y5E9 798 aa10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 NSD1Q96L73 2696 aaPredicted RBP10.91□□□□□ -0.66
CTDNEP1-205ENST00000570828 ARID1AO14497 2285 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 A0A096LPI6 279 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 A0A1W2PP18 115 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 ZC3H12DA2A288 527 aaKnown RBP10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 TRIM64A6NGJ6 449 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 TRIM64BA6NI03 449 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 C5orf58C9J3I9 102 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 CLIC1O00299 241 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 GPIP06744 558 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 HEXAP06865 529 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 IMPDH2P12268 514 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 MRPL19P49406 292 aaKnown RBP10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 CDH11P55287 796 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 LTBQ06643 244 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 FAPQ12884 760 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 RGNQ15493 299 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 OR7A5Q15622 319 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 KRTAP21-3Q3LHN1 58 aa10.9□□□□□ -0.66
CTDNEP1-205ENST00000570828 ZNF672Q499Z4 452 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms