RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 HTR3EA5X5Y0 456 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 LRRN3E7EW58 273 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 H0YJX3 145 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 NPIPB7O75200 414 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 IGF2P01344 180 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 OPN1LWP04000 364 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 POU3F2P20265 443 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 RPS5P46782 204 aaKnown RBP13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 HSPA13P48723 471 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 ZNF74Q16587 644 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 C1QL3Q5VWW1 255 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 C19orf48Q6RUI8 117 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 TMPRSS11FQ6ZWK6 438 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 SLC46A3Q7Z3Q1 461 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 OR13C2Q8NGS9 318 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 TAAR8Q969N4 342 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 RDH12Q96NR8 316 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 ZNF184Q99676 751 aaPredicted RBP13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 PTDSS2Q9BVG9 487 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 TOR3AQ9H497 397 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 ENOPH1Q9UHY7 261 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 SLC6A5Q9Y345 797 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 ZNF337Q9Y3M9 751 aa13.9□□□□□ -0.18
HERPUD1-219ENST00000570273 GJE1A6NN92 205 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 DLGAP1O14490 977 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 CDC42EP2O14613 210 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 SOX14O95416 240 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 SNAP29O95721 258 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 BGLAPP02818 100 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 FUT1P19526 365 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 FKBP2P26885 142 aaKnown RBP13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 SHC1P29353 583 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 IDUAP35475 653 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 COX10Q12887 443 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 SLC10A1Q14973 349 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 INAQ16352 499 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 TMEM176BQ3YBM2 270 aaPredicted RBP13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 FAM69AQ5T7M9 428 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 CD300LDQ6UXZ3 194 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 PARP8Q8N3A8 854 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 FANK1Q8TC84 345 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 SLC25A36Q96CQ1 311 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 ARL5BQ96KC2 179 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 OR5B2Q96R09 309 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 MBOAT4Q96T53 435 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 TAPBPLQ9BX59 468 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 POTEKPQ9BYX7 375 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 DEFB127Q9H1M4 99 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 EXO5Q9H790 373 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 ZDHHC11Q9H8X9 412 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 LUZP4Q9P127 313 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 LIPGQ9Y5X9 500 aa13.9□□□□□ -0.19
HERPUD1-219ENST00000570273 PCNX3Q9H6A9 2034 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 H3BN98 237 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 LINC01387J3KSC0 135 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 OR2T1O43869 369 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 OSMP13725 252 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 POU1F1P28069 291 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 GTF2E2P29084 291 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 SLC9A3P48764 834 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 CLK1P49759 484 aaKnown RBP13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 GFRA1P56159 465 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 NUP107P57740 925 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 RAC1P63000 192 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 PLEKHN1Q494U1 663 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 SLC36A3Q495N2 470 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 NADK2Q4G0N4 442 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 ZNF620Q6ZNG0 422 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 RASSF6Q6ZTQ3 369 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 OAFQ86UD1 273 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 CYGBQ8WWM9 190 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 PNPLA2Q96AD5 504 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 KLHL15Q96M94 604 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 MOGAT1Q96PD6 335 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 GABARAPL3Q9BY60 117 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 TSPAN10Q9H1Z9 355 aaPredicted RBP13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 LDAHQ9H6V9 325 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 FKRPQ9H9S5 495 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 ACKR4Q9NPB9 350 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 NANSQ9NR45 359 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 REV1Q9UBZ9 1251 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 AP4B1Q9Y6B7 739 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 CDH10Q9Y6N8 788 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 CACNA1BQ00975 2339 aa13.89□□□□□ -0.19
HERPUD1-219ENST00000570273 TRAV27A0A087WT01 109 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 TRGV5A0A0B4J1U4 118 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 A0A1W2PNR3 127 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 HCN1O60741 890 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 MT-ATP6P00846 226 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 CHMP24386 653 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 LTBQ06643 244 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 MYBPHQ13203 477 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 OR7A5Q15622 319 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 WLSQ5T9L3 541 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 RPUSD3Q6P087 351 aaKnown RBP13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 TRILQ7L0X0 811 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 MAMDC2Q7Z304 686 aaPredicted RBP13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 NANOGNBQ7Z5D8 188 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 KIF18BQ86Y91 864 aa13.88□□□□□ -0.19
HERPUD1-219ENST00000570273 DHRSXQ8N5I4 330 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms