RNA–Protein interactions for RNA: ENST00000569794.1

CHD9-220, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-220ENST00000569794 ZC4H2Q9NQZ6 224 aa3.96□□□□□ -1.78
CHD9-220ENST00000569794 TEX10Q9NXF1 929 aaPredicted RBP3.96□□□□□ -1.78
CHD9-220ENST00000569794 MS4A12Q9NXJ0 267 aa3.96□□□□□ -1.78
CHD9-220ENST00000569794 CLN8Q9UBY8 286 aa3.96□□□□□ -1.78
CHD9-220ENST00000569794 HMGXB4Q9UGU5 601 aa3.96□□□□□ -1.78
CHD9-220ENST00000569794 CYTH4Q9UIA0 394 aa3.96□□□□□ -1.78
CHD9-220ENST00000569794 ELF5Q9UKW6 265 aaPredicted RBP3.96□□□□□ -1.78
CHD9-220ENST00000569794 DDX19BQ9UMR2 479 aa3.96□□□□□ -1.78
CHD9-220ENST00000569794 ARAP1Q96P48 1450 aa3.96□□□□□ -1.78
CHD9-220ENST00000569794 ERCC6L2Q5T890 1561 aa3.96□□□□□ -1.78
CHD9-220ENST00000569794 FRMPD4Q14CM0 1322 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 UNC13AQ9UPW8 1703 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 NPIPA5A0A0B4J1W7 369 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 CCDC182A6NF36 153 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 NPIPA5E9PKD4 350 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 LMO7DNF2Z398 122 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 GOLGA8RI6L899 631 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 M0R3G1 203 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 CYB561D2O14569 222 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 SIGLEC5O15389 551 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 PRKAB2O43741 272 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 SCN2BO60939 215 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 HSBP1O75506 76 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 ATP5HO75947 161 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 MYO1DO94832 1006 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 AP2A1O95782 977 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 MMP1P03956 469 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 FAM157CP0CG43 387 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 CA6P23280 308 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 IFNA8P32881 189 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 SLC26A3P40879 764 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 HLCSP50747 726 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 BASP1P80723 227 aaKnown RBP3.95□□□□□ -1.78
CHD9-220ENST00000569794 EIF2B1Q14232 305 aaKnown RBP3.95□□□□□ -1.78
CHD9-220ENST00000569794 VAMP3Q15836 100 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 C18orf21Q32NC0 220 aaPredicted RBP3.95□□□□□ -1.78
CHD9-220ENST00000569794 SLC25A52Q3SY17 297 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 ATP1A1-AS1Q5TC04 95 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 C1orf94Q6P1W5 598 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 HACD2Q6Y1H2 254 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 TPGS1Q6ZTW0 290 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 Q6ZVQ6 151 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 HSD11B1LQ7Z5J1 315 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 TSEN54Q7Z6J9 526 aaKnown RBP3.95□□□□□ -1.78
CHD9-220ENST00000569794 ERICH1Q86X53 443 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 FAM89BQ8N5H3 189 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 ZSCAN4Q8NAM6 433 aaPredicted RBP3.95□□□□□ -1.78
CHD9-220ENST00000569794 INO80EQ8NBZ0 244 aaPredicted RBP3.95□□□□□ -1.78
CHD9-220ENST00000569794 OR4F6Q8NGB9 312 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 OR52I1Q8NGK6 324 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 CDC26Q8NHZ8 85 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 CDKL2Q92772 493 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.95□□□□□ -1.78
CHD9-220ENST00000569794 CXorf40BQ96DE9 158 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 NSMCE3Q96MG7 304 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 ZNF641Q96N77 438 aaPredicted RBP3.95□□□□□ -1.78
CHD9-220ENST00000569794 CPXM1Q96SM3 734 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 LPAR4Q99677 370 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 TMEM121Q9BTD3 319 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 OPN3Q9H1Y3 402 aaPredicted RBP3.95□□□□□ -1.78
CHD9-220ENST00000569794 ADNPQ9H2P0 1102 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 SIGLEC8Q9NYZ4 499 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 RCOR3Q9P2K3 495 aaPredicted RBP3.95□□□□□ -1.78
CHD9-220ENST00000569794 MBD2Q9UBB5 411 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 ZNF221Q9UK13 617 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 POFUT2Q9Y2G5 429 aa3.95□□□□□ -1.78
CHD9-220ENST00000569794 AK6Q9Y3D8 172 aaKnown RBP3.95□□□□□ -1.78
CHD9-220ENST00000569794 BAZ1AQ9NRL2 1556 aaPredicted RBP3.94□□□□□ -1.78
CHD9-220ENST00000569794 A0A1W2PPV9 198 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 E9PQ18 207 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 K7ERI5 159 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 RAB29O14966 203 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 PPIHO43447 177 aaKnown RBP3.94□□□□□ -1.78
CHD9-220ENST00000569794 TOXO94900 526 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 PIGRP01833 764 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 NR3C1P04150 777 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 HBQ1P09105 142 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 TCN1P20061 433 aaPredicted RBP3.94□□□□□ -1.78
CHD9-220ENST00000569794 ATP5A1P25705 553 aaKnown RBP3.94□□□□□ -1.78
CHD9-220ENST00000569794 GABRR2P28476 465 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 RPL9P32969 192 aaKnown RBP3.94□□□□□ -1.78
CHD9-220ENST00000569794 GNPDA1P46926 289 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 NPBWR2P48146 333 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 KCNJ3P48549 501 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 ERVK-25P63136 954 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 PLOD1Q02809 727 aaPredicted RBP3.94□□□□□ -1.78
CHD9-220ENST00000569794 GUCY2DQ02846 1103 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 SELENBP1Q13228 472 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 ORC2Q13416 577 aaPredicted RBP3.94□□□□□ -1.78
CHD9-220ENST00000569794 DGCR6Q14129 220 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 VGLL4Q14135 290 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 PIGHQ14442 188 aaPredicted RBP3.94□□□□□ -1.78
CHD9-220ENST00000569794 PPP1R3AQ16821 1122 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 HSDL1Q3SXM5 330 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 XKR4Q5GH76 650 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 GPRIN3Q6ZVF9 776 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 PID1Q7Z2X4 250 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 CDKL3Q8IVW4 592 aaPredicted RBP3.94□□□□□ -1.78
CHD9-220ENST00000569794 C17orf78Q8N4C9 275 aa3.94□□□□□ -1.78
CHD9-220ENST00000569794 GVQW1Q8N7I0 195 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms