RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 HOXC12P31275 282 aa25.98■■□□□ 1.75
RAB40C-211ENST00000568586 ADAM8P78325 824 aa25.98■■□□□ 1.75
RAB40C-211ENST00000568586 SLC17A1Q14916 467 aa25.98■■□□□ 1.75
RAB40C-211ENST00000568586 FBXW9Q5XUX1 488 aa25.98■■□□□ 1.75
RAB40C-211ENST00000568586 DHRS4L2Q6PKH6 230 aa25.98■■□□□ 1.75
RAB40C-211ENST00000568586 BHLHA15Q7RTS1 189 aaPredicted RBP25.98■■□□□ 1.75
RAB40C-211ENST00000568586 SSX8Q7RTT4 187 aa25.98■■□□□ 1.75
RAB40C-211ENST00000568586 ATG4DQ86TL0 474 aaPredicted RBP25.98■■□□□ 1.75
RAB40C-211ENST00000568586 CADM2Q8N3J6 435 aa25.98■■□□□ 1.75
RAB40C-211ENST00000568586 NFKBIDQ8NI38 313 aa25.98■■□□□ 1.75
RAB40C-211ENST00000568586 IGFBPL1Q8WX77 278 aa25.98■■□□□ 1.75
RAB40C-211ENST00000568586 DNAJA3Q96EY1 480 aa25.98■■□□□ 1.75
RAB40C-211ENST00000568586 PLPPR2Q96GM1 343 aa25.98■■□□□ 1.75
RAB40C-211ENST00000568586 A8MVM7 634 aa25.97■■□□□ 1.75
RAB40C-211ENST00000568586 EVPLLA8MZ36 301 aa25.97■■□□□ 1.75
RAB40C-211ENST00000568586 TMEM229AB2RXF0 380 aa25.97■■□□□ 1.75
RAB40C-211ENST00000568586 IGHV1-2P23083 117 aa25.97■■□□□ 1.75
RAB40C-211ENST00000568586 IDUAP35475 653 aa25.97■■□□□ 1.75
RAB40C-211ENST00000568586 PIF1Q9H611 641 aa25.97■■□□□ 1.75
RAB40C-211ENST00000568586 NDUFAF1Q9Y375 327 aa25.97■■□□□ 1.75
RAB40C-211ENST00000568586 ZFHX3Q15911 3703 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 GPIP06744 558 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 C6orf89Q6UWU4 347 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 ZNF704Q6ZNC4 412 aaPredicted RBP25.96■■□□□ 1.75
RAB40C-211ENST00000568586 RETREG3Q86VR2 466 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 P2RY8Q86VZ1 359 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 LRRC75A-AS1Q8N1F1 130 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 ZNF433Q8N7K0 673 aaPredicted RBP25.96■■□□□ 1.75
RAB40C-211ENST00000568586 LSMEM1Q8N8F7 131 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 STK35Q8TDR2 534 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 APH1AQ96BI3 265 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 SPATA5L1Q9BVQ7 753 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 SF3B5Q9BWJ5 86 aaKnown RBP25.96■■□□□ 1.75
RAB40C-211ENST00000568586 UBTD1Q9HAC8 227 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 NGBQ9NPG2 151 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 MALT1Q9UDY8 824 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 FLVCR1Q9Y5Y0 555 aa25.96■■□□□ 1.75
RAB40C-211ENST00000568586 NF1P21359 2839 aa25.95■■□□□ 1.74
RAB40C-211ENST00000568586 A0A0G2JND7 137 aa25.95■■□□□ 1.74
RAB40C-211ENST00000568586 CD99P14209 185 aa25.95■■□□□ 1.74
RAB40C-211ENST00000568586 CEACAM7Q14002 265 aa25.95■■□□□ 1.74
RAB40C-211ENST00000568586 ADAM5Q6NVV9 412 aa25.95■■□□□ 1.74
RAB40C-211ENST00000568586 LSRQ86X29 649 aaPredicted RBP25.95■■□□□ 1.74
RAB40C-211ENST00000568586 KRT73Q86Y46 540 aa25.95■■□□□ 1.74
RAB40C-211ENST00000568586 KRTAP1-3Q8IUG1 177 aa25.95■■□□□ 1.74
RAB40C-211ENST00000568586 ANKRD27Q96NW4 1050 aa25.95■■□□□ 1.74
RAB40C-211ENST00000568586 C12orf10Q9HB07 376 aa25.95■■□□□ 1.74
RAB40C-211ENST00000568586 NIPSNAP3AQ9UFN0 247 aaPredicted RBP25.95■■□□□ 1.74
RAB40C-211ENST00000568586 SLC9A8Q9Y2E8 581 aa25.95■■□□□ 1.74
RAB40C-211ENST00000568586 ARID1AO14497 2285 aa25.95■■□□□ 1.74
RAB40C-211ENST00000568586 AQP7P3A6NL99 342 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 FRS3O43559 492 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 FZD7O75084 574 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 MRPL33O75394 65 aaKnown RBP25.94■■□□□ 1.74
RAB40C-211ENST00000568586 LYZL6O75951 148 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 BNIP2Q12982 314 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 SCARB2Q14108 478 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 TIMM23BQ5SRD1 257 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 NCMAPQ5T1S8 102 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 ZC3HAV1Q7Z2W4 902 aaKnown RBP25.94■■□□□ 1.74
RAB40C-211ENST00000568586 DHDDSQ86SQ9 333 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 COMTD1Q86VU5 262 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 TMEM45BQ96B21 275 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 DLL4Q9NR61 685 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 PARPBPQ9NWS1 579 aa25.94■■□□□ 1.74
RAB40C-211ENST00000568586 PDLIM1O00151 329 aa25.93■■□□□ 1.74
RAB40C-211ENST00000568586 ANGPT2O15123 496 aa25.93■■□□□ 1.74
RAB40C-211ENST00000568586 PLAUP00749 431 aa25.93■■□□□ 1.74
RAB40C-211ENST00000568586 SLC6A2P23975 617 aa25.93■■□□□ 1.74
RAB40C-211ENST00000568586 P2RY4P51582 365 aa25.93■■□□□ 1.74
RAB40C-211ENST00000568586 C1orf140Q5VVS0 124 aa25.93■■□□□ 1.74
RAB40C-211ENST00000568586 PTOV1Q86YD1 416 aa25.93■■□□□ 1.74
RAB40C-211ENST00000568586 TMEM99Q8N816 258 aa25.93■■□□□ 1.74
RAB40C-211ENST00000568586 HIPK4Q8NE63 616 aa25.93■■□□□ 1.74
RAB40C-211ENST00000568586 BHLHE22Q8NFJ8 381 aaPredicted RBP25.93■■□□□ 1.74
RAB40C-211ENST00000568586 CGREF1Q99674 301 aa25.93■■□□□ 1.74
RAB40C-211ENST00000568586 DSCAMO60469 2012 aa25.92■■□□□ 1.74
RAB40C-211ENST00000568586 PRORSD1PA6NEY8 169 aa25.92■■□□□ 1.74
RAB40C-211ENST00000568586 TPST1O60507 370 aa25.92■■□□□ 1.74
RAB40C-211ENST00000568586 GGT1P19440 569 aa25.92■■□□□ 1.74
RAB40C-211ENST00000568586 ADSLP30566 484 aaPredicted RBP25.92■■□□□ 1.74
RAB40C-211ENST00000568586 PCBP3P57721 371 aaKnown RBP25.92■■□□□ 1.74
RAB40C-211ENST00000568586 HOXC5Q00444 222 aa25.92■■□□□ 1.74
RAB40C-211ENST00000568586 EGR4Q05215 589 aa25.92■■□□□ 1.74
RAB40C-211ENST00000568586 RBBP4Q09028 425 aa25.92■■□□□ 1.74
RAB40C-211ENST00000568586 FOXD4Q12950 439 aaPredicted RBP25.92■■□□□ 1.74
RAB40C-211ENST00000568586 OR7A5Q15622 319 aa25.92■■□□□ 1.74
RAB40C-211ENST00000568586 OTUD3Q5T2D3 398 aaPredicted RBP25.92■■□□□ 1.74
RAB40C-211ENST00000568586 ZIC4Q8N9L1 334 aa25.92■■□□□ 1.74
RAB40C-211ENST00000568586 ZNF607Q96SK3 696 aa25.92■■□□□ 1.74
RAB40C-211ENST00000568586 ESRP2Q9H6T0 727 aaKnown RBP25.92■■□□□ 1.74
RAB40C-211ENST00000568586 MRGBPQ9NV56 204 aa25.92■■□□□ 1.74
RAB40C-211ENST00000568586 ASB6Q9NWX5 421 aa25.92■■□□□ 1.74
RAB40C-211ENST00000568586 C2CD3Q4AC94 2353 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 CADP27708 2225 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 OR5H1A6NKK0 313 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 FTCDNL1E5RQL4 147 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 HS3ST1O14792 307 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 TMCC2O75069 709 aa25.91■■□□□ 1.74
RAB40C-211ENST00000568586 AKR7A3O95154 331 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms