RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 IGFBP2P18065 325 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 ELK4P28324 431 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 SSTR2P30874 369 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 NRF1Q16656 503 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 FBXL19-AS1Q494R0 122 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 HMBOX1Q6NT76 420 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 PPP4R4Q6NUP7 873 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 SHQ1Q6PI26 577 aaKnown RBP12.07□□□□□ -0.48
CLK3-218ENST00000566926 CBLN3Q6UW01 205 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 ZBTB49Q6ZSB9 765 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 ESPNLQ6ZVH7 1005 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 AMIGO2Q86SJ2 522 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 RANBP3LQ86VV4 465 aaPredicted RBP12.07□□□□□ -0.48
CLK3-218ENST00000566926 DMRTC2Q8IXT2 367 aaPredicted RBP12.07□□□□□ -0.48
CLK3-218ENST00000566926 ZNF440Q8IYI8 595 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 ICA1LQ8NDH6 482 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 OR5K1Q8NHB7 308 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 NRG4Q8WWG1 115 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 ARSGQ96EG1 525 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 MRGPRX4Q96LA9 322 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 RDH12Q96NR8 316 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 ZNF184Q99676 751 aaPredicted RBP12.07□□□□□ -0.48
CLK3-218ENST00000566926 ARHGDIGQ99819 225 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 SEMA6AQ9H2E6 1030 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 PIGMQ9H3S5 423 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 NPDC1Q9NQX5 325 aaPredicted RBP12.07□□□□□ -0.48
CLK3-218ENST00000566926 OAZ3Q9UMX2 235 aa12.07□□□□□ -0.48
CLK3-218ENST00000566926 CDHR4A6H8M9 788 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 ARRDC5A6NEK1 342 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 EIF1AYO14602 144 aaKnown RBP12.06□□□□□ -0.48
CLK3-218ENST00000566926 AP3D1O14617 1153 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 CYP7B1O75881 506 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 MT-ND1P03886 318 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 THRBP10828 461 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 PGCP20142 388 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 FPR1P21462 350 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 CCR4P51679 360 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 SUCLG1P53597 346 aaKnown RBP12.06□□□□□ -0.48
CLK3-218ENST00000566926 CLDN15P56746 228 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 CLDN20P56880 219 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 RGS8P57771 180 aaPredicted RBP12.06□□□□□ -0.48
CLK3-218ENST00000566926 FGFBP1Q14512 234 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 IQCCQ4KMZ1 466 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 KIF18BQ86Y91 864 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 LINC00471Q8N535 108 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 RELL2Q8NC24 303 aaPredicted RBP12.06□□□□□ -0.48
CLK3-218ENST00000566926 PIK3C3Q8NEB9 887 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 GPR119Q8TDV5 335 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 TMEM234Q8WY98 164 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 RNASE6Q93091 150 aaKnown RBP12.06□□□□□ -0.48
CLK3-218ENST00000566926 INTS12Q96CB8 462 aaKnown RBP12.06□□□□□ -0.48
CLK3-218ENST00000566926 C14orf79Q96F83 325 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 PRRC1Q96M27 445 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 RBM4BQ9BQ04 359 aaKnown RBP12.06□□□□□ -0.48
CLK3-218ENST00000566926 RBM4Q9BWF3 364 aaKnown RBP12.06□□□□□ -0.48
CLK3-218ENST00000566926 PRRG4Q9BZD6 226 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 AMBRA1Q9C0C7 1298 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 GABARAPL1Q9H0R8 117 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 ANKRD19PQ9H560 264 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 NTN4Q9HB63 628 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 TIGARQ9NQ88 270 aa12.06□□□□□ -0.48
CLK3-218ENST00000566926 MCTS1Q9ULC4 181 aaKnown RBP12.06□□□□□ -0.48
CLK3-218ENST00000566926 SAMHD1Q9Y3Z3 626 aaKnown RBP12.06□□□□□ -0.48
CLK3-218ENST00000566926 ADGRG4Q8IZF6 3080 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 ANKHD1Q8IWZ3 2542 aaKnown RBP12.05□□□□□ -0.48
CLK3-218ENST00000566926 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 SHISA8B8ZZ34 492 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 EEF1E1-BLOC1S5C9J1V9 151 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 EEF1E1O43324 174 aaKnown RBP12.05□□□□□ -0.48
CLK3-218ENST00000566926 SYNGR4O95473 234 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 TGM6O95932 706 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 UBTFL6P0CB48 400 aaPredicted RBP12.05□□□□□ -0.48
CLK3-218ENST00000566926 UQCRBP14927 111 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 PRKCAP17252 672 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 EIF1AXP47813 144 aaKnown RBP12.05□□□□□ -0.48
CLK3-218ENST00000566926 OR1E2P47887 323 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 SLC6A8P48029 635 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 HMGA2P52926 109 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 EPS8Q12929 822 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 FOXF1Q12946 379 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 PON3Q15166 354 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 RFX4Q33E94 735 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 SLC25A53Q5H9E4 307 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 MRPL2Q5T653 305 aaKnown RBP12.05□□□□□ -0.48
CLK3-218ENST00000566926 LPCAT4Q643R3 524 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 GTF2IRD2BQ6EKJ0 949 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 POMZP3Q6PJE2 187 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 IZUMO2Q6UXV1 221 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 ZNF836Q6ZNA1 936 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 ZNF550Q7Z398 422 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 GTF2IRD2Q86UP8 949 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 GGNQ86UU5 652 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 VRK2Q86Y07 508 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 POC1BQ8TC44 478 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 ST8SIA1Q92185 356 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 ZG16BQ96DA0 208 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 DHRS1Q96LJ7 313 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 KLHL15Q96M94 604 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 CIB1Q99828 191 aa12.05□□□□□ -0.48
CLK3-218ENST00000566926 QRSL1Q9H0R6 528 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms