RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 OR11A1Q9GZK7 315 aa10.73□□□□□ -0.69
GTF3C1-204ENST00000564664 WDR55Q9H6Y2 383 aaPredicted RBP10.73□□□□□ -0.69
GTF3C1-204ENST00000564664 MANSC1Q9H8J5 431 aa10.73□□□□□ -0.69
GTF3C1-204ENST00000564664 CACYBPQ9HB71 228 aaKnown RBP10.73□□□□□ -0.69
GTF3C1-204ENST00000564664 SDR39U1Q9NRG7 319 aaPredicted RBP10.73□□□□□ -0.69
GTF3C1-204ENST00000564664 UPB1Q9UBR1 384 aa10.73□□□□□ -0.69
GTF3C1-204ENST00000564664 IFT52Q9Y366 437 aa10.73□□□□□ -0.69
GTF3C1-204ENST00000564664 FLVCR1Q9Y5Y0 555 aa10.73□□□□□ -0.69
GTF3C1-204ENST00000564664 SLC25A15Q9Y619 301 aa10.73□□□□□ -0.69
GTF3C1-204ENST00000564664 PLCE1Q9P212 2302 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 A0A096LPI6 279 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 A0A0G2JPF8 293 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 OR6C65A6NJZ3 312 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 A8MVM7 634 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 HNRNPCL2B2RXH8 293 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 HNRNPCL3B7ZW38 293 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 AP3D1O14617 1153 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 KLF11O14901 512 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 HNRNPCL1O60812 293 aaKnown RBP10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 RAMP1O60894 148 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 RAD51DO75771 328 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 ANP32DO95626 131 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 GSNP06396 782 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 HNRNPCL4P0DMR1 293 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 IMPDH2P12268 514 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 BMP4P12644 408 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 CCNA2P20248 432 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 EDNRAP25101 427 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 CD40P25942 277 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 PCSK6P29122 969 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 TTKP33981 857 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 NTF4P34130 210 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 CDKN2CP42773 168 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 CDH11P55287 796 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 FAPQ12884 760 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 VEZF1Q14119 521 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 COX20Q5RI15 118 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 PRAMEF8Q5VWM4 474 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 PRAMEF7Q5VXH5 474 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 NXNQ6DKJ4 435 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 ZNF544Q6NX49 715 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 DNM1P46Q6ZS02 220 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 ABHD12BQ7Z5M8 362 aaPredicted RBP10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 POMGNT2Q8NAT1 580 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 HS6ST2Q96MM7 605 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 SLCO5A1Q9H2Y9 848 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 RAD21L1Q9H4I0 556 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 FKRPQ9H9S5 495 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 TPT1P8Q9HAU6 139 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 CBLN4Q9NTU7 201 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 AMDHD2Q9Y303 409 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 DSPPQ9NZW4 1301 aa10.72□□□□□ -0.69
GTF3C1-204ENST00000564664 LIPT2A6NK58 231 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 UBDO15205 165 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 TLX2O43763 284 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 ERLIN1O75477 346 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 IGHV3-9P01782 118 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 IGHV4-39P01824 125 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 TP53P04637 393 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 KITP10721 976 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 MPGP29372 298 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 ACAA2P42765 397 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 CRATP43155 626 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 POLR2JP52435 117 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 MVDP53602 400 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 DSTNP60981 165 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 OTUD3Q5T2D3 398 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 RNF220Q5VTB9 566 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 TMEM225Q6GV28 225 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 SLC22A25Q6T423 547 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 CASP12Q6UXS9 341 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 ATG4DQ86TL0 474 aaPredicted RBP10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 FBXL14Q8N1E6 418 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 OR52N5Q8NH56 324 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 SLC38A5Q8WUX1 472 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 RHNO1Q9BSD3 238 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 TAPBPLQ9BX59 468 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 MOV10Q9HCE1 1003 aaKnown RBP10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 OBP2BQ9NPH6 170 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 SLC17A5Q9NRA2 495 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 NPAP1Q9NZP6 1156 aa10.71□□□□□ -0.69
GTF3C1-204ENST00000564664 ABCA1O95477 2261 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 HEATR1Q9H583 2144 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 AQP7P3A6NL99 342 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 INAFM1C9JVW0 142 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 RNF223E7ERA6 249 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 CRLF1O75462 422 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 TGDSO95455 350 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 WNT11O96014 354 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 C1QCP02747 245 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 ITGA5P08648 1049 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 ACVR1BP36896 505 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 CDKN1AP38936 164 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 MRPL19P49406 292 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 ZNF83P51522 516 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 PRPS1P60891 318 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 MAGOHP61326 146 aaKnown RBP10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 DMTNQ08495 405 aa10.7□□□□□ -0.7
GTF3C1-204ENST00000564664 CEACAM7Q14002 265 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms