RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 POTEKPQ9BYX7 375 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 TRIM15Q9C019 465 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 MEPEQ9NQ76 525 aaPredicted RBP11.17□□□□□ -0.62
KARS-204ENST00000564578 MEMO1Q9Y316 297 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 HDGFL3Q9Y3E1 203 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 CD8B2A6NJW9 211 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 E9PLN8 166 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 STAMBPO95630 424 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 PTGER4P35408 488 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 H3F3AP84243 136 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 ST3GAL3Q11203 375 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 PON3Q15166 354 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 C1orf185Q5T7R7 199 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 C1orf140Q5VVS0 124 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 B3GNT6Q6ZMB0 384 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 PIK3C3Q8NEB9 887 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 SLC7A13Q8TCU3 470 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 POP5Q969H6 163 aaKnown RBP11.17□□□□□ -0.62
KARS-204ENST00000564578 TAAR8Q969N4 342 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 TRIB1Q96RU8 372 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 PIP5K1AQ99755 562 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 VKORC1Q9BQB6 163 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 CHID1Q9BWS9 393 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 CALHM2Q9HA72 323 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 SELENONQ9NZV5 590 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 AURKCQ9UQB9 309 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 TRAPPC4Q9Y296 219 aa11.17□□□□□ -0.62
KARS-204ENST00000564578 A0A1W2PRQ8 180 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 LIPT2A6NK58 231 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 ANKRD65E5RJM6 399 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 FTCDNL1E5RQL4 147 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 SULT2B1O00204 365 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 LRRTM2O43300 516 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 AQP8O94778 261 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 PMS2P2O95744 297 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 GPIP06744 558 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 HOXD4P09016 255 aaPredicted RBP11.16□□□□□ -0.62
KARS-204ENST00000564578 GLI4P10075 376 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 RAP2AP10114 183 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 UMPSP11172 480 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 NQO1P15559 274 aaKnown RBP11.16□□□□□ -0.62
KARS-204ENST00000564578 ITGA2P17301 1181 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 ENPP1P22413 925 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 RPS5P46782 204 aaKnown RBP11.16□□□□□ -0.62
KARS-204ENST00000564578 RPS3AP61247 264 aaKnown RBP11.16□□□□□ -0.62
KARS-204ENST00000564578 CHRNB3Q05901 458 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 LTBQ06643 244 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 DGCR6Q14129 220 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 SGCBQ16585 318 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 ZNF239Q16600 458 aaKnown RBP11.16□□□□□ -0.62
KARS-204ENST00000564578 FAM98BQ52LJ0 330 aaKnown RBP11.16□□□□□ -0.62
KARS-204ENST00000564578 FJX1Q86VR8 437 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 PAPD5Q8NDF8 572 aaKnown RBP11.16□□□□□ -0.62
KARS-204ENST00000564578 FUZQ9BT04 418 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 FNDC11Q9BVV2 318 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 CCM2LQ9NUG4 571 aaPredicted RBP11.16□□□□□ -0.62
KARS-204ENST00000564578 PAQR5Q9NXK6 330 aaPredicted RBP11.16□□□□□ -0.62
KARS-204ENST00000564578 FAM32AQ9Y421 112 aaKnown RBP11.16□□□□□ -0.62
KARS-204ENST00000564578 MED12LQ86YW9 2145 aa11.16□□□□□ -0.62
KARS-204ENST00000564578 SPTBN1Q01082 2364 aaKnown RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 A0A087WUU8 490 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 MBD3L4A6NDZ8 208 aaPredicted RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 MBD3L3A6NE82 208 aaPredicted RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 MBD3L5A6NJ08 208 aaPredicted RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 ZNF814B7Z6K7 855 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 LRRN3E7EW58 273 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 J3QKU1 62 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 CCL21O00585 134 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 SMAD9O15198 467 aaKnown RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 FZD7O75084 574 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 PEX14O75381 377 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 FPR1P21462 350 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 UGT2B15P54855 530 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 CASP6P55212 293 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 ACTR3P61158 418 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 SRSF1Q07955 248 aaKnown RBP eCLIP11.15□□□□□ -0.62
KARS-204ENST00000564578 PMPCAQ10713 525 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 KPNB1Q14974 876 aaKnown RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 TBPL2Q6SJ96 375 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 CHMP1BQ7LBR1 199 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 C9orf106Q8NAJ2 232 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 MBD3L2Q8NHZ7 208 aaPredicted RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 TMEM239Q8WW34 195 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 ROBO4Q8WZ75 1007 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 CPNE4Q96A23 557 aaPredicted RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 DENND2DQ9H6A0 471 aaPredicted RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 C20orf141Q9NUB4 165 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 TESMINQ9Y4I5 508 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 PHF3Q92576 2039 aaKnown RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 IGHV3-15A0A0B4J1V0 119 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 TRBV4-1A0A0J9YWV2 114 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 ERICH4A6NGS2 130 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 SLC22A20A6NK97 555 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 RAMP1O60894 148 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 H1F0P07305 194 aaKnown RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 IDUAP35475 653 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 RBM34P42696 430 aaKnown RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 AGFG1P52594 562 aaKnown RBP11.15□□□□□ -0.62
KARS-204ENST00000564578 TRAM2Q15035 370 aa11.15□□□□□ -0.62
KARS-204ENST00000564578 SEC23BQ15437 767 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms