RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 TPT1P8Q9HAU6 139 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 MAGED1Q9Y5V3 778 aaPredicted RBP13.22□□□□□ -0.29
SPG7-210ENST00000564409 FLVCR1Q9Y5Y0 555 aa13.22□□□□□ -0.29
SPG7-210ENST00000564409 A0A0G2JPF8 293 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 TMEM72A0PK05 275 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 FAM234BA2RU67 622 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 HNRNPCL2B2RXH8 293 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 HNRNPCL3B7ZW38 293 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 PDLIM1O00151 329 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 ABCD4O14678 606 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 HNRNPCL1O60812 293 aaKnown RBP13.21□□□□□ -0.29
SPG7-210ENST00000564409 RAD51DO75771 328 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 TFPTP0C1Z6 253 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 HNRNPCL4P0DMR1 293 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 KITP10721 976 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 CCNA2P20248 432 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 CRATP43155 626 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 POLR2JP52435 117 aaKnown RBP13.21□□□□□ -0.29
SPG7-210ENST00000564409 MVDP53602 400 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 CDH11P55287 796 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 DSTNP60981 165 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 MAGOHP61326 146 aaKnown RBP13.21□□□□□ -0.29
SPG7-210ENST00000564409 FAPQ12884 760 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 TNK1Q13470 666 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 SLC17A1Q14916 467 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 GABRA6Q16445 453 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 CASP12Q6UXS9 341 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 ABHD12BQ7Z5M8 362 aaPredicted RBP13.21□□□□□ -0.29
SPG7-210ENST00000564409 MIER2Q8N344 545 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 POMGNT2Q8NAT1 580 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 OR52P1PQ8NH57 321 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 PNPT1Q8TCS8 783 aaKnown RBP13.21□□□□□ -0.29
SPG7-210ENST00000564409 MGARPQ8TDB4 240 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 SLC38A5Q8WUX1 472 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 SLC35B4Q969S0 331 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 TMEM45BQ96B21 275 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 TLCD1Q96CP7 247 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 UPB1Q9UBR1 384 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 IFT52Q9Y366 437 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 SLC25A15Q9Y619 301 aa13.21□□□□□ -0.29
SPG7-210ENST00000564409 OR6C65A6NJZ3 312 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 A8MVM7 634 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 RAMP1O60894 148 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 VAMP5O95183 116 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 IGHV3-9P01782 118 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 C1QCP02747 245 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 IMPDH2P12268 514 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 NTF4P34130 210 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 FADDQ13158 208 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 VEZF1Q14119 521 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 MAPK11Q15759 364 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.2□□□□□ -0.3
SPG7-210ENST00000564409 HMGN2P46Q86SG4 172 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 ATG4DQ86TL0 474 aaPredicted RBP13.2□□□□□ -0.3
SPG7-210ENST00000564409 NEUROG1Q92886 237 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 BOD1Q96IK1 185 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 ADAD1Q96M93 576 aaKnown RBP13.2□□□□□ -0.3
SPG7-210ENST00000564409 HS6ST2Q96MM7 605 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 SLCO5A1Q9H2Y9 848 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 TMBIM4Q9HC24 238 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 NPAP1Q9NZP6 1156 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 AMDHD2Q9Y303 409 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 JMJD1CQ15652 2540 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 ABCA1O95477 2261 aa13.2□□□□□ -0.3
SPG7-210ENST00000564409 ZANQ9Y493 2812 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 CHD3Q12873 2000 aaKnown RBP13.19□□□□□ -0.3
SPG7-210ENST00000564409 LIPT2A6NK58 231 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 AQP7P3A6NL99 342 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 TGDSO95455 350 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 CD8AP01732 235 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 BCHEP06276 602 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 ITGA5P08648 1049 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 BMP4P12644 408 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 ETFAP13804 333 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 CD40P25942 277 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 MPGP29372 298 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 ACAA2P42765 397 aaKnown RBP13.19□□□□□ -0.3
SPG7-210ENST00000564409 MRPL19P49406 292 aaKnown RBP13.19□□□□□ -0.3
SPG7-210ENST00000564409 SLC9B1Q4ZJI4 515 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 OTUD3Q5T2D3 398 aaPredicted RBP13.19□□□□□ -0.3
SPG7-210ENST00000564409 SLC22A25Q6T423 547 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 DNM1P46Q6ZS02 220 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 OR52N5Q8NH56 324 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 DHRS9Q9BPW9 319 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 SPATA9Q9BWV2 254 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 TAPBPLQ9BX59 468 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 REG4Q9BYZ8 158 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 FKRPQ9H9S5 495 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 BCL2L10Q9HD36 194 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 SLC6A13Q9NSD5 602 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 RLIMQ9NVW2 624 aa13.19□□□□□ -0.3
SPG7-210ENST00000564409 ZNF443Q9Y2A4 671 aaPredicted RBP13.19□□□□□ -0.3
SPG7-210ENST00000564409 CR1P17927 2039 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 ALPK2Q86TB3 2170 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 ZC3H12DA2A288 527 aaKnown RBP13.18□□□□□ -0.3
SPG7-210ENST00000564409 WNT11O96014 354 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 BMP2P12643 396 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 TTKP33981 857 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 CDKN1AP38936 164 aa13.18□□□□□ -0.3
SPG7-210ENST00000564409 ZNF83P51522 516 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 182.9 ms