RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 PCDH17O14917 1159 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 TPST2O60704 377 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 SELLP14151 372 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 MEOX2P50222 304 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 RAB25P57735 213 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 EBPQ15125 230 aaKnown RBP16.25■□□□□ 0.19
GDE1-203ENST00000564172 MICAQ29983 383 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 JAZF1Q86VZ6 243 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 C9orf40Q8IXQ3 194 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 ZNF565Q8N9K5 539 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 SAV1Q9H4B6 383 aaPredicted RBP16.25■□□□□ 0.19
GDE1-203ENST00000564172 HPF1Q9NWY4 346 aa16.25■□□□□ 0.19
GDE1-203ENST00000564172 C2orf92A0A1B0GVN3 265 aa16.24■□□□□ 0.19
GDE1-203ENST00000564172 DRD5P21918 477 aa16.24■□□□□ 0.19
GDE1-203ENST00000564172 MAP2K6P52564 334 aa16.24■□□□□ 0.19
GDE1-203ENST00000564172 ARMC4Q5T2S8 1044 aa16.24■□□□□ 0.19
GDE1-203ENST00000564172 MRPL2Q5T653 305 aaKnown RBP16.24■□□□□ 0.19
GDE1-203ENST00000564172 FAHD1Q6P587 224 aa16.24■□□□□ 0.19
GDE1-203ENST00000564172 FAM198BQ6UWH4 519 aa16.24■□□□□ 0.19
GDE1-203ENST00000564172 ATG16L2Q8NAA4 619 aa16.24■□□□□ 0.19
GDE1-203ENST00000564172 LCORQ96JN0 433 aaPredicted RBP16.24■□□□□ 0.19
GDE1-203ENST00000564172 LMF1Q96S06 567 aa16.24■□□□□ 0.19
GDE1-203ENST00000564172 PRR14Q9BWN1 585 aa16.24■□□□□ 0.19
GDE1-203ENST00000564172 TOR3AQ9H497 397 aa16.24■□□□□ 0.19
GDE1-203ENST00000564172 PISDQ9UG56 409 aa16.24■□□□□ 0.19
GDE1-203ENST00000564172 GPN3Q9UHW5 284 aaPredicted RBP16.24■□□□□ 0.19
GDE1-203ENST00000564172 NXT1Q9UKK6 140 aaKnown RBP16.24■□□□□ 0.19
GDE1-203ENST00000564172 KNTC1P50748 2209 aa16.24■□□□□ 0.19
GDE1-203ENST00000564172 TUBAL3A6NHL2 446 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 H1F0P07305 194 aaKnown RBP16.23■□□□□ 0.19
GDE1-203ENST00000564172 JMJD7P0C870 316 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 IGFBP5P24593 272 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 RGS8P57771 180 aaPredicted RBP16.23■□□□□ 0.19
GDE1-203ENST00000564172 IL18R1Q13478 541 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 EIPR1Q53HC9 387 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 TMEM205Q6UW68 189 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 GDPD1Q8N9F7 314 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 NFAM1Q8NET5 270 aaPredicted RBP16.23■□□□□ 0.19
GDE1-203ENST00000564172 OR52N1Q8NH53 320 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 PRRC1Q96M27 445 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 TAAR9Q96RI9 348 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 GAL3ST4Q96RP7 486 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 ZPBPQ9BS86 351 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 TRBV4-1A0A0J9YWV2 114 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 CDHR4A6H8M9 788 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 FRG2CA6NGY1 282 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 NPIPB9F8W1W9 429 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 MITFO75030 526 aaPredicted RBP16.23■□□□□ 0.19
GDE1-203ENST00000564172 STK17BO94768 372 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 CYC1P08574 325 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 CCNYL3P0C7X3 344 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 DCAF7P61962 342 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 ZNF91Q05481 1191 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 DECR1Q16698 335 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.23■□□□□ 0.19
GDE1-203ENST00000564172 RFX4Q33E94 735 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 KLHL12Q53G59 568 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 PDZK1Q5T2W1 519 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 OR8H3Q8N146 312 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 ZNF555Q8NEP9 628 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 B3GNT7Q8NFL0 401 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 OR10G2Q8NGC3 310 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 FBLIM1Q8WUP2 373 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 FRMD6Q96NE9 622 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 FEVQ99581 238 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 WDR77Q9BQA1 342 aaPredicted RBP16.23■□□□□ 0.19
GDE1-203ENST00000564172 CTPS2Q9NRF8 586 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 FAM118AQ9NWS6 357 aa16.23■□□□□ 0.19
GDE1-203ENST00000564172 A0A1W2PNU3 283 aaPredicted RBP16.22■□□□□ 0.19
GDE1-203ENST00000564172 OR6C76A6NM76 312 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 C9J4A7 227 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 MYL9P24844 172 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 RYKP34925 604 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 RNF144AP50876 292 aaPredicted RBP16.22■□□□□ 0.19
GDE1-203ENST00000564172 HOXC5Q00444 222 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 MEP1AQ16819 746 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 HES3Q5TGS1 186 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 FAM69BQ5VUD6 431 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 PAPD4Q6PIY7 484 aaKnown RBP16.22■□□□□ 0.19
GDE1-203ENST00000564172 RRM2BQ7LG56 351 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 SLC29A4Q7RTT9 530 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 CPEB2Q7Z5Q1 589 aaKnown RBP16.22■□□□□ 0.19
GDE1-203ENST00000564172 GALNT5Q7Z7M9 940 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 STX12Q86Y82 276 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 SLC5A8Q8N695 610 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 APCDD1LQ8NCL9 501 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 MBOAT4Q96T53 435 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 FNDC11Q9BVV2 318 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 NRSN2Q9GZP1 204 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 SLC22A4Q9H015 551 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 ORC6Q9Y5N6 252 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 ELAVL4P26378 380 aaKnown RBP16.22■□□□□ 0.19
GDE1-203ENST00000564172 ATP12AP54707 1039 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 SMIM11AP58511 58 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 PIGFQ07326 219 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 CD47Q08722 323 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 KCNAB2Q13303 367 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 NCF4Q15080 339 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 ZNF141Q15928 474 aa16.22■□□□□ 0.19
GDE1-203ENST00000564172 ARMCX4Q5H9R4 360 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms