RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 OTUD3Q5T2D3 398 aaPredicted RBP15.59■□□□□ 0.09
NME3-205ENST00000563854 PIAS4Q8N2W9 510 aaPredicted RBP15.59■□□□□ 0.09
NME3-205ENST00000563854 CLIP4Q8N3C7 705 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 OR52E4Q8NGH9 312 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 SMAP2Q8WU79 429 aaPredicted RBP15.59■□□□□ 0.09
NME3-205ENST00000563854 GTF2H4Q92759 462 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 MAL2Q969L2 176 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 C7orf26Q96N11 449 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 PAIP1Q9H074 479 aaKnown RBP15.59■□□□□ 0.09
NME3-205ENST00000563854 NPAP1Q9NZP6 1156 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 UPB1Q9UBR1 384 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 ZNF232Q9UNY5 417 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 SLC9A8Q9Y2E8 581 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 PCDHB14Q9Y5E9 798 aa15.59■□□□□ 0.09
NME3-205ENST00000563854 MAGED1Q9Y5V3 778 aaPredicted RBP15.59■□□□□ 0.09
NME3-205ENST00000563854 FAM171A2A8MVW0 826 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 C5orf58C9J3I9 102 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 CLIC1O00299 241 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 ABCD4O14678 606 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 AKR7A3O95154 331 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 GPIP06744 558 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 HEXAP06865 529 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 ZNF83P51522 516 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 FOXG1P55316 489 aaPredicted RBP15.58■□□□□ 0.08
NME3-205ENST00000563854 RGNQ15493 299 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 RNF220Q5VTB9 566 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 WBP2NLQ6ICG8 309 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 SERPINA11Q86U17 422 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 GPAT4Q86UL3 456 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 GOLGA6L1Q8N7Z2 621 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 EBF4Q9BQW3 602 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 RAD21L1Q9H4I0 556 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 ARMC7Q9H6L4 198 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 ZNF701Q9NV72 531 aaPredicted RBP15.58■□□□□ 0.08
NME3-205ENST00000563854 ADPRHL2Q9NX46 363 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 THUMPD1Q9NXG2 353 aaKnown RBP15.58■□□□□ 0.08
NME3-205ENST00000563854 TAS2R16Q9NYV7 291 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 CCDC167Q9P0B6 97 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 FLVCR1Q9Y5Y0 555 aa15.58■□□□□ 0.08
NME3-205ENST00000563854 NIPBLQ6KC79 2804 aaeCLIP15.58■□□□□ 0.08
NME3-205ENST00000563854 A0A0G2JPF8 293 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 HNRNPCL2B2RXH8 293 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 HNRNPCL3B7ZW38 293 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 M0R1B8 84 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 FRS3O43559 492 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 HNRNPCL1O60812 293 aaKnown RBP15.57■□□□□ 0.08
NME3-205ENST00000563854 THBS1P07996 1170 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 HNRNPCL4P0DMR1 293 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 PTNP21246 168 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 ACAA2P42765 397 aaKnown RBP15.57■□□□□ 0.08
NME3-205ENST00000563854 IDH3AP50213 366 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 H3F3AP84243 136 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 HOXC5Q00444 222 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 VEZF1Q14119 521 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 KRTAP21-3Q3LHN1 58 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 ZNF311Q5JNZ3 666 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 PAQR6Q6TCH4 344 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 P2RY8Q86VZ1 359 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 TMEM99Q8N816 258 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 TRMT61AQ96FX7 289 aaKnown RBP15.57■□□□□ 0.08
NME3-205ENST00000563854 ATP6V1G3Q96LB4 118 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 SPATA9Q9BWV2 254 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 TAPBPLQ9BX59 468 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 C1QTNF6Q9BXI9 259 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 TRIM2Q9C040 744 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 ADAM19Q9H013 955 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 ALG2Q9H553 416 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 MALT1Q9UDY8 824 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 POU2F3Q9UKI9 436 aa15.57■□□□□ 0.08
NME3-205ENST00000563854 A0A096LPI6 279 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 LIPT2A6NK58 231 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 TMCC2O75069 709 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 PGM3O95394 542 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 ITGA5P08648 1049 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 DANCRP0C864 163 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 MAP2K6P52564 334 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 AQP5P55064 265 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 SPOCK1Q08629 439 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 SLC17A1Q14916 467 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 TTMPQ5BVD1 217 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 TMEM108Q6UXF1 575 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 NFKBIDQ8NI38 313 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 BBS10Q8TAM1 723 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 SPDL1Q96EA4 605 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 A4GALTQ9NPC4 353 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 SLC7A10Q9NS82 523 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 PARPBPQ9NWS1 579 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 CISD1Q9NZ45 108 aaKnown RBP15.56■□□□□ 0.08
NME3-205ENST00000563854 IFT52Q9Y366 437 aa15.56■□□□□ 0.08
NME3-205ENST00000563854 A8MVM7 634 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 SHISA9B4DS77 424 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 TGDSO95455 350 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 PAX1P15863 534 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 CDH2P19022 906 aaPredicted RBP15.55■□□□□ 0.08
NME3-205ENST00000563854 PCSK6P29122 969 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 FADDQ13158 208 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 GABRA6Q16445 453 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 PGGHGQ32M88 737 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 GCNT6Q5T4J0 391 aa15.55■□□□□ 0.08
NME3-205ENST00000563854 TSPO2Q5TGU0 170 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms