RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 HEXBP07686 556 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 AQP2P41181 271 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 RNF4P78317 190 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 ZNF85Q03923 595 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 SIGLEC14Q08ET2 396 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 GALEQ14376 348 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 OXA1LQ15070 435 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 TBC1D25Q3MII6 688 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 ZNF385CQ66K41 422 aaPredicted RBP17.43■□□□□ 0.38
SMPD3-203ENST00000563226 TUBA3EQ6PEY2 450 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 DPY19L2P2Q6ZN68 376 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 SSX6Q7RTT6 188 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 CCDC190Q86UF4 302 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 C10orf53Q8N6V4 93 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 APCDD1LQ8NCL9 501 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 C7orf57Q8NEG2 295 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 FAM83FQ8NEG4 500 aaPredicted RBP17.43■□□□□ 0.38
SMPD3-203ENST00000563226 SMPDL3BQ92485 455 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 SLC25A46Q96AG3 418 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 KTI12Q96EK9 354 aaPredicted RBP17.43■□□□□ 0.38
SMPD3-203ENST00000563226 KCTD7Q96MP8 289 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 CCNL2Q96S94 520 aaPredicted RBP17.43■□□□□ 0.38
SMPD3-203ENST00000563226 KATNB1Q9BVA0 655 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 ABCB10Q9NRK6 738 aa17.43■□□□□ 0.38
SMPD3-203ENST00000563226 A0A0C4DFX4 3053 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 TBX1O43435 398 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 SCO2O43819 266 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 ZNF354AO60765 605 aaPredicted RBP17.42■□□□□ 0.38
SMPD3-203ENST00000563226 IL1AP01583 271 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 HNRNPA0Q13151 305 aaKnown RBP17.42■□□□□ 0.38
SMPD3-203ENST00000563226 TMPRSS11AQ6ZMR5 421 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 NFAM1Q8NET5 270 aaPredicted RBP17.42■□□□□ 0.38
SMPD3-203ENST00000563226 NAT6Q93015 286 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 DNAJA3Q96EY1 480 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 NECAB3Q96P71 396 aaPredicted RBP17.42■□□□□ 0.38
SMPD3-203ENST00000563226 NMNAT3Q96T66 252 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 TTTY10Q9BZA0 68 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 TBL1XR1Q9BZK7 514 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 ADAM19Q9H013 955 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 MMP25Q9NPA2 562 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 ZMIZ1Q9ULJ6 1067 aa17.42■□□□□ 0.38
SMPD3-203ENST00000563226 TRDV1A0A1B0GX56 115 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 A0A1W2PQD3 144 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 E9PI62 339 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 BLOC1S5-TXNDC5H3BN57 136 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 UPK1BO75841 260 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 TFP02787 698 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 ITPKBP27987 946 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 GTF2E2P29084 291 aaKnown RBP17.41■□□□□ 0.38
SMPD3-203ENST00000563226 LCN1P31025 176 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 FGF9P31371 208 aaPredicted RBP17.41■□□□□ 0.38
SMPD3-203ENST00000563226 HCCSP53701 268 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 PNLIPRP2P54317 469 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 PHF19Q5T6S3 580 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 POMZP3Q6PJE2 187 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 NPEPL1Q8NDH3 523 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 THAP3Q8WTV1 239 aaPredicted RBP17.41■□□□□ 0.38
SMPD3-203ENST00000563226 DDOQ99489 341 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 CTRCQ99895 268 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 SIAEQ9HAT2 523 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 RHBDL2Q9NX52 303 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 BABAM2Q9NXR7 383 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 HAO2Q9NYQ3 351 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 KLHL21Q9UJP4 597 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 A0A1W2PQL4 384 aaPredicted RBP17.41■□□□□ 0.38
SMPD3-203ENST00000563226 SHISA3A0PJX4 238 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 OR6C68A6NDL8 312 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 CD8B2A6NJW9 211 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 ADAM10O14672 748 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 ALOX12BO75342 701 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 CD8BP10966 210 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 TNFSF8P32971 234 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 ETV6P41212 452 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 GRK6P43250 576 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 CAV3P56539 151 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 DCDP81605 110 aaKnown RBP17.41■□□□□ 0.38
SMPD3-203ENST00000563226 ZNF45Q02386 682 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 DNASE1L3Q13609 305 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 TRIM16LQ309B1 348 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 AKIRIN1Q9H9L7 192 aaPredicted RBP17.41■□□□□ 0.38
SMPD3-203ENST00000563226 NANSQ9NR45 359 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 ASB6Q9NWX5 421 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 CRNNQ9UBG3 495 aaPredicted RBP17.41■□□□□ 0.38
SMPD3-203ENST00000563226 PLEKHB1Q9UF11 243 aaPredicted RBP17.41■□□□□ 0.38
SMPD3-203ENST00000563226 HIF3AQ9Y2N7 669 aa17.41■□□□□ 0.38
SMPD3-203ENST00000563226 SAGE2PA6NJ88 616 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 GABRPO00591 440 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 FADS1O60427 444 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 SERPINI2O75830 405 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 TGM1P22735 817 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 EVI2BP34910 448 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 SLC6A8P48029 635 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 MARCH9Q86YJ5 346 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 LYSMD2Q8IV50 215 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 LAX1Q8IWV1 398 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 LRRC75AQ8NAA5 344 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 NLGN4YQ8NFZ3 816 aaPredicted RBP17.4■□□□□ 0.38
SMPD3-203ENST00000563226 SNRNP27Q8WVK2 155 aaKnown RBP17.4■□□□□ 0.38
SMPD3-203ENST00000563226 ASB15Q8WXK1 588 aa17.4■□□□□ 0.38
SMPD3-203ENST00000563226 Q96M85 177 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms