RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 HOXB1P14653 301 aaPredicted RBP16.09■□□□□ 0.17
TPM1-226ENST00000560959 NAAAQ02083 359 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 MAPK14Q16539 360 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 UGT3A2Q3SY77 523 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 HIKESHIQ53FT3 197 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 EMBQ6PCB8 327 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 SYT10Q6XYQ8 523 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 USP43Q70EL4 1123 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 C6orf120Q7Z4R8 191 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 ZIC4Q8N9L1 334 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 MIPOL1Q8TD10 442 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 UBASH3BQ8TF42 649 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 WDR60Q8WVS4 1066 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 PPP3R2Q96LZ3 170 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 SNX18Q96RF0 628 aa16.09■□□□□ 0.17
TPM1-226ENST00000560959 FAM157AC9JC47 383 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 RIPK2O43353 540 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 IGLV1-44P01699 117 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 IMPDH2P12268 514 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 PRPS1L1P21108 318 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 CRHR1P34998 444 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 ACTG1P63261 375 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 HBA1P69905 142 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 POU3F1Q03052 451 aaPredicted RBP16.08■□□□□ 0.16
TPM1-226ENST00000560959 TBRG1Q3YBR2 411 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 AAED1Q7RTV5 226 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 OR1K1Q8NGR3 316 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 OR5AK3PQ8NH89 298 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 ZNF418Q8TF45 676 aaPredicted RBP16.08■□□□□ 0.16
TPM1-226ENST00000560959 SERHL2Q9H4I8 314 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 METTL17Q9H7H0 456 aaPredicted RBP16.08■□□□□ 0.16
TPM1-226ENST00000560959 GRPEL1Q9HAV7 217 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 PRDM4Q9UKN5 801 aa16.08■□□□□ 0.16
TPM1-226ENST00000560959 OR6C65A6NJZ3 312 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 CFLARO15519 480 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 IFNGR1P15260 489 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 CDH2P19022 906 aaPredicted RBP16.07■□□□□ 0.16
TPM1-226ENST00000560959 RYKP34925 604 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 UBE2NP61088 152 aaKnown RBP16.07■□□□□ 0.16
TPM1-226ENST00000560959 KCNJ10P78508 379 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 LGALS3BPQ08380 585 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 RINLQ6ZS11 566 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 C16orf62Q7Z3J2 963 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 GLCCI1Q86VQ1 547 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 RIMKLAQ8IXN7 391 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 ARFGAP2Q8N6H7 521 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 BCL2L2Q92843 193 aaPredicted RBP16.07■□□□□ 0.16
TPM1-226ENST00000560959 GCDHQ92947 438 aaPredicted RBP16.07■□□□□ 0.16
TPM1-226ENST00000560959 DNAJA3Q96EY1 480 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 ANKRD27Q96NW4 1050 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.07■□□□□ 0.16
TPM1-226ENST00000560959 FIS1Q9Y3D6 152 aa16.07■□□□□ 0.16
TPM1-226ENST00000560959 TMED7-TICAM2A0A0A6YYA0 188 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 A0A1W2PPM1 405 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 hCG_2039718K7EN88 272 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 BCAS1O75363 584 aaPredicted RBP16.06■□□□□ 0.16
TPM1-226ENST00000560959 IGKV3-15P01624 115 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 CECR9P0C854 216 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 NPR2P20594 1047 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 IDH2P48735 452 aaKnown RBP16.06■□□□□ 0.16
TPM1-226ENST00000560959 POLR2HP52434 150 aaKnown RBP16.06■□□□□ 0.16
TPM1-226ENST00000560959 RPS26P62854 115 aaKnown RBP16.06■□□□□ 0.16
TPM1-226ENST00000560959 PTGR1Q14914 329 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 FAM153CQ494X1 144 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 TYW3Q6IPR3 259 aaKnown RBP16.06■□□□□ 0.16
TPM1-226ENST00000560959 VHLLQ6RSH7 139 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 DDIASQ8IXT1 998 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 OR9K2Q8NGE7 335 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 TWIST2Q8WVJ9 160 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 AURKBQ96GD4 344 aaPredicted RBP16.06■□□□□ 0.16
TPM1-226ENST00000560959 ZNF385AQ96PM9 386 aaKnown RBP16.06■□□□□ 0.16
TPM1-226ENST00000560959 DUSP26Q9BV47 211 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 GATA5Q9BWX5 397 aaPredicted RBP16.06■□□□□ 0.16
TPM1-226ENST00000560959 OSGIN1Q9UJX0 560 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 TMED7Q9Y3B3 224 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 WDR45Q9Y484 360 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 SPEF1Q9Y4P9 236 aa16.06■□□□□ 0.16
TPM1-226ENST00000560959 TMEM129A0AVI4 362 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 TRIM77I1YAP6 450 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 FAAHO00519 579 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 KRT33AO76009 404 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 GPIP06744 558 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 CALCRP30988 508 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 HILS1P60008 231 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 HGFACQ04756 655 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 OTUD3Q5T2D3 398 aaPredicted RBP16.05■□□□□ 0.16
TPM1-226ENST00000560959 ATAD3BQ5T9A4 648 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 TEX29Q8N6K0 151 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 CCDC63Q8NA47 563 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 RBM4Q9BWF3 364 aaKnown RBP16.05■□□□□ 0.16
TPM1-226ENST00000560959 TBK1Q9UHD2 729 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 MID2Q9UJV3 735 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 PCDHB10Q9UN67 800 aa16.05■□□□□ 0.16
TPM1-226ENST00000560959 NUP214P35658 2090 aaPredicted RBP16.05■□□□□ 0.16
TPM1-226ENST00000560959 TMEM72A0PK05 275 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 AQP7P3A6NL99 342 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 ZNF587BE7ETH6 402 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 PIP5K1BO14986 540 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 TRIM13O60858 407 aa16.04■□□□□ 0.16
TPM1-226ENST00000560959 PEX11AO75192 247 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms