RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 ME2P23368 584 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 RPS3P23396 243 aaKnown RBP eCLIP5.36□□□□□ -1.55
HERC1-208ENST00000560462 MYF6P23409 242 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 PSMB4P28070 264 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 HPDP32754 393 aaPredicted RBP5.36□□□□□ -1.55
HERC1-208ENST00000560462 NR2C2P49116 596 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 PRPS1P60891 318 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 ARF1P84077 181 aaKnown RBP5.36□□□□□ -1.55
HERC1-208ENST00000560462 DHX34Q14147 1143 aaKnown RBP5.36□□□□□ -1.55
HERC1-208ENST00000560462 TSTQ16762 297 aaKnown RBP5.36□□□□□ -1.55
HERC1-208ENST00000560462 TMEM44Q2T9K0 475 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 HFEQ30201 348 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 TBRG1Q3YBR2 411 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 TCP11X2Q5H9J9 407 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 CTSL3PQ5NE16 218 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 C1QTNF12Q5T7M4 302 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 SLC35E4Q6ICL7 350 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 DGAT2L7PQ6IED9 249 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 IKBIPQ70UQ0 350 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 CBLL1Q75N03 491 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.36□□□□□ -1.55
HERC1-208ENST00000560462 RFX6Q8HWS3 928 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 C17orf78Q8N4C9 275 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 RPP25LQ8N5L8 163 aaKnown RBP5.36□□□□□ -1.55
HERC1-208ENST00000560462 ZNF615Q8N8J6 731 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 PRELID2Q8N945 189 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 NEIL2Q969S2 332 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 CPNE4Q96A23 557 aaPredicted RBP5.36□□□□□ -1.55
HERC1-208ENST00000560462 RNF125Q96EQ8 232 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 TIMD4Q96H15 378 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 SLC38A2Q96QD8 506 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 SPATA25Q9BR10 227 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 REXO4Q9GZR2 422 aaKnown RBP5.36□□□□□ -1.55
HERC1-208ENST00000560462 TMEM185BQ9H7F4 350 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 EDA2RQ9HAV5 297 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 SLC17A5Q9NRA2 495 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 ASB6Q9NWX5 421 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 UBAP1Q9NZ09 502 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 KLHL9Q9P2J3 617 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 ZMAT5Q9UDW3 170 aaKnown RBP5.36□□□□□ -1.55
HERC1-208ENST00000560462 ABCG2Q9UNQ0 655 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 USH1CQ9Y6N9 552 aa5.36□□□□□ -1.55
HERC1-208ENST00000560462 FAM90A20PA6NIJ5 464 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 CLDN25C9JDP6 229 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 C9JVG2 144 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 RGS10O43665 173 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 SCO2O43819 266 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 DOK2O60496 412 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 CDC14BO60729 498 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 TRIM13O60858 407 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 NDUFS3O75489 264 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 PSMA4P25789 261 aaKnown RBP5.35□□□□□ -1.55
HERC1-208ENST00000560462 CD80P33681 288 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 GALNSP34059 522 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 TGFBR2P37173 567 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 VEGFCP49767 419 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 KLK7P49862 253 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 CCR9P51686 369 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 EFNB2P52799 333 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 BPIFB3P59826 476 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 PRAMEP78395 509 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 PAX8Q06710 450 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 STX5Q13190 355 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 KRT31Q15323 416 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 GPR68Q15743 365 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 ZIK1Q3SY52 487 aaPredicted RBP5.35□□□□□ -1.55
HERC1-208ENST00000560462 KLHL24Q6TFL4 600 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 MBOAT1Q6ZNC8 495 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 RAPH1Q70E73 1250 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 SBSPONQ8IVN8 264 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 SPARTQ8N0X7 666 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 SLC43A2Q8N370 569 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 POC1BQ8TC44 478 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 SLC5A11Q8WWX8 675 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 TANKQ92844 425 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 RAB1CQ92928 201 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 C16orf58Q96GQ5 468 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 VPS39Q96JC1 886 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 ARL5BQ96KC2 179 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 TSNARE1Q96NA8 513 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 BIRC8Q96P09 236 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 OR4K3Q96R72 315 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 ADOQ96SZ5 270 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 NAP1L3Q99457 506 aaPredicted RBP5.35□□□□□ -1.55
HERC1-208ENST00000560462 PSD2Q9BQI7 771 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 PTDSS2Q9BVG9 487 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 GHITMQ9H3K2 345 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 RPF2Q9H7B2 306 aaKnown RBP5.35□□□□□ -1.55
HERC1-208ENST00000560462 CXorf36Q9H7Y0 433 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 CXorf21Q9HAI6 301 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 SLC7A10Q9NS82 523 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 KRT84Q9NSB2 600 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 LIN7CQ9NUP9 197 aaKnown RBP5.35□□□□□ -1.55
HERC1-208ENST00000560462 MRPS18AQ9NVS2 196 aaKnown RBP5.35□□□□□ -1.55
HERC1-208ENST00000560462 MARCH4Q9P2E8 410 aaPredicted RBP5.35□□□□□ -1.55
HERC1-208ENST00000560462 GALPQ9UBC7 116 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 SLC2A6Q9UGQ3 507 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 SIGLEC9Q9Y336 463 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 DOCK11Q5JSL3 2073 aa5.35□□□□□ -1.55
HERC1-208ENST00000560462 KRTAP9-6A0A140TA67 174 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms