RNA–Protein interactions for RNA: ENST00000560005.6

PSEN1-225, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-225ENST00000560005 NDRG3Q9UGV2 375 aa18.46■□□□□ 0.55
PSEN1-225ENST00000560005 ZNF443Q9Y2A4 671 aaPredicted RBP18.46■□□□□ 0.55
PSEN1-225ENST00000560005 LRCH1Q9Y2L9 728 aa18.46■□□□□ 0.55
PSEN1-225ENST00000560005 TESMINQ9Y4I5 508 aa18.46■□□□□ 0.55
PSEN1-225ENST00000560005 ORC6Q9Y5N6 252 aa18.46■□□□□ 0.55
PSEN1-225ENST00000560005 NPFFR2Q9Y5X5 522 aa18.46■□□□□ 0.55
PSEN1-225ENST00000560005 CUBNO60494 3623 aa18.46■□□□□ 0.54
PSEN1-225ENST00000560005 GXYLT2A0PJZ3 443 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 ANKRD33BA6NCL7 494 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 TNFRSF11BO00300 401 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 TO15178 435 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 SIAH2O43255 324 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 CRLF1O75462 422 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 UQCRBP14927 111 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 KRT20P35900 424 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 OR1E2P47887 323 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 MASP1P48740 699 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 HMGA2P52926 109 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 DAG1Q14118 895 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 ACKR1Q16570 336 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 NRF1Q16656 503 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 WIPI1Q5MNZ9 446 aaPredicted RBP18.45■□□□□ 0.54
PSEN1-225ENST00000560005 RNF220Q5VTB9 566 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 FIGNL1Q6PIW4 674 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 CMIPQ8IY22 773 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 LINC00471Q8N535 108 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 ABTB1Q969K4 478 aaPredicted RBP18.45■□□□□ 0.54
PSEN1-225ENST00000560005 SLC29A1Q99808 456 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 ARHGDIGQ99819 225 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 WWTR1Q9GZV5 400 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 GABARAPL1Q9H0R8 117 aa18.45■□□□□ 0.54
PSEN1-225ENST00000560005 CHD3Q12873 2000 aaKnown RBP18.44■□□□□ 0.54
PSEN1-225ENST00000560005 RNF212BA8MTL3 300 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 SOCS2O14508 198 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 NME6O75414 186 aaPredicted RBP18.44■□□□□ 0.54
PSEN1-225ENST00000560005 CNOT4O95628 575 aaKnown RBP18.44■□□□□ 0.54
PSEN1-225ENST00000560005 CYP4B1P13584 511 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 NID1P14543 1247 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 CDH2P19022 906 aaPredicted RBP18.44■□□□□ 0.54
PSEN1-225ENST00000560005 RRM2P31350 389 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 ATP12AP54707 1039 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 FBXW4P57775 412 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 ZNF141Q15928 474 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 CCNJQ5T5M9 372 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 FNDC7Q5VTL7 733 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 NPSR1Q6W5P4 371 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 EPHX4Q8IUS5 362 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 ADIPOR1Q96A54 375 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 NTNG2Q96CW9 530 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 TMCC3Q9ULS5 477 aa18.44■□□□□ 0.54
PSEN1-225ENST00000560005 DEFB108AA8MXU0 73 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 PDLIM1O00151 329 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 AP3D1O14617 1153 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 TP53I11O14683 189 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 DENRO43583 198 aaKnown RBP18.43■□□□□ 0.54
PSEN1-225ENST00000560005 SNX4O95219 450 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 GADD45GO95257 159 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 IL33O95760 270 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 RAD23AP54725 363 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 NRG3P56975 720 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 SPIBQ01892 262 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 MED21Q13503 144 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 EBPQ15125 230 aaKnown RBP18.43■□□□□ 0.54
PSEN1-225ENST00000560005 OTUD3Q5T2D3 398 aaPredicted RBP18.43■□□□□ 0.54
PSEN1-225ENST00000560005 PLXDC2Q6UX71 529 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 VRK2Q86Y07 508 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 TAGAPQ8N103 731 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 ZNF527Q8NB42 609 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 TOR1AIP2Q8NFQ8 470 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 ZPLD1Q8TCW7 415 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 MAGEE2Q8TD90 523 aaPredicted RBP18.43■□□□□ 0.54
PSEN1-225ENST00000560005 GIPC3Q8TF64 312 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 INTS12Q96CB8 462 aaKnown RBP18.43■□□□□ 0.54
PSEN1-225ENST00000560005 PIK3IP1Q96FE7 263 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 TUBA1CQ9BQE3 449 aa18.43■□□□□ 0.54
PSEN1-225ENST00000560005 SMPD3Q9NY59 655 aaPredicted RBP18.43■□□□□ 0.54
PSEN1-225ENST00000560005 DSCAMO60469 2012 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 EI24O14681 340 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 RCBTB2O95199 551 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 ANXA8P13928 327 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 TNFRSF1BP20333 461 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 RGS8P57771 180 aaPredicted RBP18.42■□□□□ 0.54
PSEN1-225ENST00000560005 EEF1A1P68104 462 aaKnown RBP18.42■□□□□ 0.54
PSEN1-225ENST00000560005 DEF8Q6ZN54 512 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 TSEN54Q7Z6J9 526 aaKnown RBP18.42■□□□□ 0.54
PSEN1-225ENST00000560005 RANBP3LQ86VV4 465 aaPredicted RBP18.42■□□□□ 0.54
PSEN1-225ENST00000560005 GRAMD2AQ8IUY3 354 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 GCNT2Q8N0V5 402 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 ZG16BQ96DA0 208 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 PRRC1Q96M27 445 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 ZFP3Q96NJ6 502 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 FNDC11Q9BVV2 318 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 ANGPTL4Q9BY76 406 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 UBQLN4Q9NRR5 601 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 DTX4Q9Y2E6 619 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 LYVE1Q9Y5Y7 322 aa18.42■□□□□ 0.54
PSEN1-225ENST00000560005 ARRDC5A6NEK1 342 aa18.41■□□□□ 0.54
PSEN1-225ENST00000560005 PRAMEF25A6NGN4 478 aa18.41■□□□□ 0.54
PSEN1-225ENST00000560005 A8MXE2 369 aa18.41■□□□□ 0.54
PSEN1-225ENST00000560005 FMO6PO60774 539 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms