RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 APOBEC1P41238 236 aaKnown RBP7.13□□□□□ -1.27
TRAF3-205ENST00000558700 HTR3AP46098 478 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 CLK1P49759 484 aaKnown RBP7.13□□□□□ -1.27
TRAF3-205ENST00000558700 CASP9P55211 416 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 CDH11P55287 796 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 BSPH1Q075Z2 132 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 BST1Q10588 318 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 GNA13Q14344 377 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 PDK3Q15120 406 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 PPA1Q15181 289 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 MAPK14Q16539 360 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 HHATQ5VTY9 493 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 OLIG3Q7RTU3 272 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 SPATA19Q7Z5L4 167 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 ANKRD42Q8N9B4 389 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 RAB3IL1Q8TBN0 382 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 PIWIL2Q8TC59 973 aaKnown RBP7.13□□□□□ -1.27
TRAF3-205ENST00000558700 WDR60Q8WVS4 1066 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 APH1AQ96BI3 265 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF524Q96C55 264 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 MUCL1Q96DR8 90 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 TRMT61AQ96FX7 289 aaKnown RBP7.13□□□□□ -1.27
TRAF3-205ENST00000558700 TRNT1Q96Q11 434 aaKnown RBP7.13□□□□□ -1.27
TRAF3-205ENST00000558700 PANX1Q96RD7 426 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF300Q96RE9 604 aaPredicted RBP7.13□□□□□ -1.27
TRAF3-205ENST00000558700 ZBTB18Q99592 522 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 PAIP2Q9BPZ3 127 aaKnown RBP7.13□□□□□ -1.27
TRAF3-205ENST00000558700 CCDC106Q9BWC9 280 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 PARD6BQ9BYG5 372 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 CTPS2Q9NRF8 586 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 FAIMQ9NVQ4 179 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 PRSS50Q9UI38 385 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 ING1Q9UK53 422 aaPredicted RBP7.13□□□□□ -1.27
TRAF3-205ENST00000558700 LIPT1Q9Y234 373 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 NOSIPQ9Y314 301 aaKnown RBP7.13□□□□□ -1.27
TRAF3-205ENST00000558700 HDGFL3Q9Y3E1 203 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 ROS1P08922 2347 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 ZFHX3Q15911 3703 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF469Q96JG9 3925 aaPredicted RBP7.12□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF814B7Z6K7 855 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 HMGN4O00479 90 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 FAAHO00519 579 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 SDHDO14521 159 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 HDAC3O15379 428 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 ALDOCP09972 364 aaKnown RBP7.12□□□□□ -1.27
TRAF3-205ENST00000558700 IDO1P14902 403 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 IGHV1-2P23083 117 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 MAGEA8P43361 318 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 POLR2HP52434 150 aaKnown RBP7.12□□□□□ -1.27
TRAF3-205ENST00000558700 SLC16A1P53985 500 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 PHC1P78364 1004 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 KCNJ10P78508 379 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 PPP2R2BQ00005 443 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 PIN1Q13526 163 aaPredicted RBP7.12□□□□□ -1.27
TRAF3-205ENST00000558700 VEZF1Q14119 521 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF672Q499Z4 452 aaPredicted RBP7.12□□□□□ -1.27
TRAF3-205ENST00000558700 TNFAIP8L3Q5GJ75 292 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 TIMM23BQ5SRD1 257 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 SLC35F1Q5T1Q4 408 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 FBXW9Q5XUX1 488 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 AP1ARQ63HQ0 302 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 SEZ6L2Q6UXD5 910 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 LRRC74BQ6ZQY2 392 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 P2RY8Q86VZ1 359 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 RNF130Q86XS8 419 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF440Q8IYI8 595 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 UBE2J2Q8N2K1 259 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 CIARTQ8N365 385 aaPredicted RBP7.12□□□□□ -1.27
TRAF3-205ENST00000558700 GLB1L3Q8NCI6 653 aaPredicted RBP7.12□□□□□ -1.27
TRAF3-205ENST00000558700 KBTBD8Q8NFY9 601 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 PMM1Q92871 262 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 DDIT4LQ96D03 193 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 OR52E6Q96RD3 313 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 C20orf27Q9GZN8 174 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 SLC38A1Q9H2H9 487 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 CACYBPQ9HB71 228 aaKnown RBP7.12□□□□□ -1.27
TRAF3-205ENST00000558700 BARX1Q9HBU1 254 aaPredicted RBP7.12□□□□□ -1.27
TRAF3-205ENST00000558700 P2RX2Q9UBL9 471 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 MALT1Q9UDY8 824 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 RAB21Q9UL25 225 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 LAMP3Q9UQV4 416 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 PRR14LQ5THK1 2151 aa7.12□□□□□ -1.27
TRAF3-205ENST00000558700 HIVEP2P31629 2446 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 USF3Q68DE3 2245 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 TMEM120BA0PK00 339 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 CCDC154A6NI56 674 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 AGAP5A6NIR3 686 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 OR5H1A6NKK0 313 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 CLDN24A6NM45 220 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF716A6NP11 495 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 C9JVG2 144 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 SLCO1B7G3V0H7 640 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 RFXANKO14593 260 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF208O43345 1280 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 EIF1BO60739 113 aaKnown RBP7.11□□□□□ -1.27
TRAF3-205ENST00000558700 BCAS1O75363 584 aaPredicted RBP7.11□□□□□ -1.27
TRAF3-205ENST00000558700 MRPL33O75394 65 aaKnown RBP7.11□□□□□ -1.27
TRAF3-205ENST00000558700 RAD51DO75771 328 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 KRT75O95678 551 aa7.11□□□□□ -1.27
TRAF3-205ENST00000558700 GSNP06396 782 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms