RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 TMEM229AB2RXF0 380 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 SLC28A1O00337 649 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 ANKRD28O15084 1053 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 EIF1BO60739 113 aaKnown RBP10.81□□□□□ -0.68
PSEN1-221ENST00000557293 C6orf47O95873 294 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 IGKV3-15P01624 115 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 GAAP10253 952 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 ARAFP10398 606 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 CCNA2P20248 432 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 FKBP2P26885 142 aaKnown RBP10.81□□□□□ -0.68
PSEN1-221ENST00000557293 RYKP34925 604 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 SLC1A3P43003 542 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 POU3F1Q03052 451 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-221ENST00000557293 TUSC1Q2TAM9 212 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 FAHD2BQ6P2I3 314 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-221ENST00000557293 KLHL24Q6TFL4 600 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 AAED1Q7RTV5 226 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 GRINAQ7Z429 371 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 LCA5Q86VQ0 697 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 LRRC17Q8N6Y2 441 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 TMEM99Q8N816 258 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 POMGNT2Q8NAT1 580 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 OR56A1Q8NGH5 318 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 MAGEE2Q8TD90 523 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-221ENST00000557293 CKAP2Q8WWK9 683 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 FAHD2AQ96GK7 314 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 KCNS3Q9BQ31 491 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 TPK1Q9H3S4 243 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 NARFLQ9H6Q4 476 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 GRIP1Q9Y3R0 1128 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 SPIN1Q9Y657 262 aaPredicted RBP10.81□□□□□ -0.68
PSEN1-221ENST00000557293 VWFP04275 2813 aa10.81□□□□□ -0.68
PSEN1-221ENST00000557293 IGHV2OR16-5A0A0B4J2B6 119 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 TMEM72A0PK05 275 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 ZC3H12DA2A288 527 aaKnown RBP10.8□□□□□ -0.68
PSEN1-221ENST00000557293 ZNF503-AS2A6NEH8 195 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 LSM1O15116 133 aaKnown RBP10.8□□□□□ -0.68
PSEN1-221ENST00000557293 SCAMP2O15127 329 aaKnown RBP10.8□□□□□ -0.68
PSEN1-221ENST00000557293 HPXP02790 462 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 HKR1P10072 659 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 DDX5P17844 614 aaKnown RBP10.8□□□□□ -0.68
PSEN1-221ENST00000557293 PAX7P23759 505 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 P2RY4P51582 365 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 RPS26P62854 115 aaKnown RBP10.8□□□□□ -0.68
PSEN1-221ENST00000557293 UBA52P62987 128 aaKnown RBP10.8□□□□□ -0.68
PSEN1-221ENST00000557293 RPL38P63173 70 aaKnown RBP10.8□□□□□ -0.68
PSEN1-221ENST00000557293 SLC35A1P78382 337 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 IL1RL1Q01638 556 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 ARHGAP11BQ3KRB8 267 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 MIDNQ504T8 468 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 LIPMQ5VYY2 423 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 EMBQ6PCB8 327 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 ZYG11AQ6WRX3 759 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 RNF165Q6ZSG1 346 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 EIF3MQ7L2H7 374 aaKnown RBP10.8□□□□□ -0.68
PSEN1-221ENST00000557293 OR9K2Q8NGE7 335 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 SFXN5Q8TD22 340 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 YIPF5Q969M3 257 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 COQ8BQ96D53 544 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 JMJD8Q96S16 334 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 SLC6A7Q99884 636 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 NAA11Q9BSU3 229 aaPredicted RBP10.8□□□□□ -0.68
PSEN1-221ENST00000557293 TMPRSS13Q9BYE2 586 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 ZNF350Q9GZX5 532 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 OSGIN1Q9UJX0 560 aa10.8□□□□□ -0.68
PSEN1-221ENST00000557293 A0A096LPE4 126 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 TMED7-TICAM2A0A0A6YYA0 188 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 A0A1W2PPZ6 126 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 CLDN24A6NM45 220 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 H3BQF6 201 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 STX11O75558 287 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 SKAP2O75563 359 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-221ENST00000557293 TFP02787 698 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 KRT16P08779 473 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 LINC00032P0C843 101 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 CBR1P16152 277 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 GPR6P46095 362 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-221ENST00000557293 SCGB2A2Q13296 93 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 SHQ1Q6PI26 577 aaKnown RBP10.79□□□□□ -0.68
PSEN1-221ENST00000557293 PAQR6Q6TCH4 344 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 ZNF572Q7Z3I7 529 aaPredicted RBP10.79□□□□□ -0.68
PSEN1-221ENST00000557293 R3HCC1LQ7Z5L2 792 aaKnown RBP10.79□□□□□ -0.68
PSEN1-221ENST00000557293 C1QL2Q7Z5L3 287 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 CLEC4FQ8N1N0 589 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 OR51F2Q8NH61 342 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 OR5AK3PQ8NH89 298 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 ZNF563Q8TA94 476 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 ANKRD27Q96NW4 1050 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 SF3B5Q9BWJ5 86 aaKnown RBP10.79□□□□□ -0.68
PSEN1-221ENST00000557293 ARMCX1Q9P291 453 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 GIMAP2Q9UG22 337 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 TMED7Q9Y3B3 224 aa10.79□□□□□ -0.68
PSEN1-221ENST00000557293 TRAV20A0A0B4J274 112 aa10.78□□□□□ -0.68
PSEN1-221ENST00000557293 PRAMEF27A3QJZ7 478 aa10.78□□□□□ -0.68
PSEN1-221ENST00000557293 AP3D1O14617 1153 aa10.78□□□□□ -0.68
PSEN1-221ENST00000557293 ZNF208O43345 1280 aa10.78□□□□□ -0.68
PSEN1-221ENST00000557293 UPK3AO75631 287 aa10.78□□□□□ -0.68
PSEN1-221ENST00000557293 AKR7A3O95154 331 aa10.78□□□□□ -0.68
PSEN1-221ENST00000557293 PNPP00491 289 aa10.78□□□□□ -0.68
PSEN1-221ENST00000557293 FSHBP01225 129 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms