RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 CNOT3O75175 753 aaKnown RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 EPPINO95925 133 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 HBQ1P09105 142 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 ANKRD34CP0C6C1 535 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 FOLR1P15328 257 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 GABRB1P18505 474 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 MAOAP21397 527 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 RPS4Y1P22090 263 aaKnown RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 ENPP1P22413 925 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 MMP11P24347 488 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 FPR3P25089 353 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 FMO3P31513 532 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 SLC5A2P31639 672 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 PCYT1AP49585 367 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 PGDP52209 483 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 SMSP52788 366 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 ATP12AP54707 1039 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 MAT1AQ00266 395 aaKnown RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 BNC1Q01954 994 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 CFHR1Q03591 330 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 MN1Q10571 1320 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 ST3GAL4Q11206 333 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 ZNF155Q12901 538 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 FOXD4Q12950 439 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 TSPAN31Q12999 210 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 KLF9Q13886 244 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 ERV3-1Q14264 604 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 KCNAB1Q14722 419 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 RAB39AQ14964 217 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 NSDHLQ15738 373 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 ZNF141Q15928 474 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 TMEM44Q2T9K0 475 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 ZNF528Q3MIS6 628 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 FLYWCH1Q4VC44 716 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 KLHL22Q53GT1 634 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 CCNJQ5T5M9 372 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 SYT6Q5T7P8 510 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 GPR107Q5VW38 600 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 RNLSQ5VYX0 342 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 PLAG1Q6DJT9 500 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 XAF1Q6GPH4 301 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 ZNF613Q6PF04 617 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 ZNF782Q6ZMW2 699 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 ZNF836Q6ZNA1 936 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 DGAT2L6Q6ZPD8 337 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 QSOX2Q6ZRP7 698 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 RASSF6Q6ZTQ3 369 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 PLEKHM3Q6ZWE6 761 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 OLIG3Q7RTU3 272 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 ZNF550Q7Z398 422 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 ARHGAP22Q7Z5H3 698 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 WDR53Q7Z5U6 358 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 GRAMD2AQ8IUY3 354 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 LACC1Q8IV20 430 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 CCDC71Q8IV32 467 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 CYP4Z2PQ8N1L4 340 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 STX19Q8N4C7 294 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 ZNF615Q8N8J6 731 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 MORN4Q8NDC4 146 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 OR4D9Q8NGE8 314 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 OR9Q2Q8NGE9 314 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 OR14A16Q8NHC5 309 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 C9orf43Q8TAL5 461 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 RAB2BQ8WUD1 216 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 PTPMT1Q8WUK0 201 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 PIK3R3Q92569 461 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 GGHQ92820 318 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 DAZLQ92904 295 aaKnown RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 MUL1Q969V5 352 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 ISOC1Q96CN7 298 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 SLC41A3Q96GZ6 507 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 MPP4Q96JB8 637 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 ART5Q96L15 291 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 SLC38A2Q96QD8 506 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 DOK1Q99704 481 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 TIMP4Q99727 224 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 WFDC6Q9BQY6 131 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 CNPPD1Q9BV87 410 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 CDCA4Q9BXL8 241 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 POLDIP3Q9BY77 421 aaKnown RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 KRTAP1-5Q9BYS1 174 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 SLC7A5P2Q9GIP4 190 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 LHPPQ9H008 270 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 GAREM1Q9H706 876 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 GPN2Q9H9Y4 310 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 FOLH1BQ9HBA9 442 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 MKKSQ9NPJ1 570 aaPredicted RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 UBQLN4Q9NRR5 601 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 MAN2C1Q9NTJ4 1040 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 FKBP14Q9NWM8 211 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 CNOT2Q9NZN8 540 aaKnown RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 SELENONQ9NZV5 590 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 WARS2Q9UGM6 360 aaKnown RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 TMEM5Q9Y2B1 443 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 RPL36Q9Y3U8 105 aaKnown RBP4.08□□□□□ -1.76
SRP54-212ENST00000556992 OR10H1Q9Y4A9 318 aa4.08□□□□□ -1.76
SRP54-212ENST00000556992 MYOFQ9NZM1 2061 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 IGKV3D-11A0A0A0MRZ8 115 aa4.07□□□□□ -1.76
SRP54-212ENST00000556992 GXYLT2A0PJZ3 443 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms