RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 NCK1P16333 377 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 P2RY1P47900 373 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 CASP4P49662 377 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 GBE1Q04446 702 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 CSTF1Q05048 431 aaKnown RBP2.85□□□□□ -1.95
SCFD1-221ENST00000556534 CHRNB3Q05901 458 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 C1orf61Q13536 156 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 MXD4Q14582 209 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-221ENST00000556534 PHYHD1Q5SRE7 291 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 AGBL2Q5U5Z8 902 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 KCNIP4Q6PIL6 250 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-221ENST00000556534 C16orf62Q7Z3J2 963 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 ACOT1Q86TX2 421 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 CLDN19Q8N6F1 224 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 ZNF740Q8NDX6 193 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 OR1F12Q8NHA8 337 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 ZNF385DQ9H6B1 395 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 METTL7AQ9H8H3 244 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 UFSP2Q9NUQ7 469 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 PCSK1NQ9UHG2 260 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 MEMO1Q9Y316 297 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 ARID1AO14497 2285 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 IGHV2-70DA0A0C4DH43 119 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 A0A1B0GUA9 196 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 A0A1W2PNV4 684 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 A8MUA0 341 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 RSPH10B2B2RC85 870 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 MSH4O15457 936 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 PRKYO43930 277 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 GNA14O95837 355 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 RSPH10BP0C881 870 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 TOP1P11387 765 aaKnown RBP2.84□□□□□ -1.95
SCFD1-221ENST00000556534 SFTPCP11686 197 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 RNH1P13489 461 aaKnown RBP2.84□□□□□ -1.95
SCFD1-221ENST00000556534 MMP11P24347 488 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 CEBPDP49716 269 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-221ENST00000556534 PRKXP51817 358 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 ACTR3P61158 418 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 BST1Q10588 318 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 CUL2Q13617 745 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 Q6ZPB1 254 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-221ENST00000556534 TAS2R42Q7RTR8 314 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 SVOPLQ8N434 492 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 AKR7LQ8NHP1 331 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 CHCHD10Q8WYQ3 142 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-221ENST00000556534 C7orf34Q96L11 122 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 CCNL2Q96S94 520 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-221ENST00000556534 CHRDL1Q9BU40 450 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 RABL2AQ9UBK7 228 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-221ENST00000556534 BTNL2Q9UIR0 455 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 CDH9Q9ULB4 789 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 RPH3ALQ9UNE2 315 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 POLDIP2Q9Y2S7 368 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 NEUROG3Q9Y4Z2 214 aa2.84□□□□□ -1.95
SCFD1-221ENST00000556534 FRMPD4Q14CM0 1322 aa2.84□□□□□ -1.96
SCFD1-221ENST00000556534 PNPLA6Q8IY17 1366 aa2.84□□□□□ -1.96
SCFD1-221ENST00000556534 ARHGAP21Q5T5U3 1957 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 A0A0U1RQS6 177 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 LRP5LA4QPB2 252 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 VSTM2BA6NLU5 285 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 ZNF716A6NP11 495 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 H0Y8G0 127 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 KIF2AO00139 706 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-221ENST00000556534 NBR2O15453 112 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 ERLIN1O75477 346 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 UGT2B17O75795 530 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 SNAPINO95295 136 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 INSP01308 110 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 IGHV4-34P06331 123 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 ZNF735P0CB33 412 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 ZNF853P0CG23 659 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 NUDT1P36639 197 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 LEPP41159 167 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 CCT3P49368 545 aaKnown RBP2.83□□□□□ -1.96
SCFD1-221ENST00000556534 PLK1P53350 603 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 CSNK1G2P78368 415 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 FGL1Q08830 312 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 CCDC173Q0VFZ6 552 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 IDI1Q13907 227 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 NSDHLQ15738 373 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 TP53I3Q53FA7 332 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 CASC10Q5T4H9 136 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 CYB5R2Q6BCY4 276 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 ATL3Q6DD88 541 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 OR4F3Q6IEY1 312 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 RNF165Q6ZSG1 346 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 NLRP9Q7RTR0 991 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 CLEC4FQ8N1N0 589 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 STXBP6Q8NFX7 210 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 OR56B4Q8NH76 319 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 SCFD1Q8WVM8 642 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 RPUSD4Q96CM3 377 aaKnown RBP2.83□□□□□ -1.96
SCFD1-221ENST00000556534 PGLYRP4Q96LB8 373 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 MTMR9Q96QG7 549 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 CCDC77Q9BR77 488 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 GPR61Q9BZJ8 451 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 NAT10Q9H0A0 1025 aaKnown RBP2.83□□□□□ -1.96
SCFD1-221ENST00000556534 LRRN3Q9H3W5 708 aa2.83□□□□□ -1.96
SCFD1-221ENST00000556534 VPS37BQ9H9H4 285 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms