RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 ORAI3Q9BRQ5 295 aa14.46□□□□□ -0.09
SYNE3-203ENST00000554873 SLC46A2Q9BY10 475 aa14.46□□□□□ -0.09
SYNE3-203ENST00000554873 TRIM36Q9NQ86 728 aa14.46□□□□□ -0.09
SYNE3-203ENST00000554873 SPG21Q9NZD8 308 aa14.46□□□□□ -0.09
SYNE3-203ENST00000554873 CCL26Q9Y258 94 aa14.46□□□□□ -0.09
SYNE3-203ENST00000554873 HTR1FP30939 366 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 MAT2AP31153 395 aaKnown RBP14.46□□□□□ -0.1
SYNE3-203ENST00000554873 ALKBH1Q13686 389 aaKnown RBP14.46□□□□□ -0.1
SYNE3-203ENST00000554873 SSX2Q16385 188 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 ZNF658BQ4V348 819 aaPredicted RBP14.46□□□□□ -0.1
SYNE3-203ENST00000554873 RAB12Q6IQ22 244 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 LIN54Q6MZP7 749 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 RHOUQ7L0Q8 258 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 KCNRGQ8N5I3 272 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 OR5D16Q8NGK9 328 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 OR5W2Q8NH69 310 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 BRIX1Q8TDN6 353 aaKnown RBP14.46□□□□□ -0.1
SYNE3-203ENST00000554873 FBXO17Q96EF6 278 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 NEURL3Q96EH8 262 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 FCRL4Q96PJ5 515 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 TMEM185BQ9H7F4 350 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 A4GALTQ9NPC4 353 aa14.46□□□□□ -0.1
SYNE3-203ENST00000554873 ANKRD20A5PA0PJZ0 165 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 B4GALT2O60909 372 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 LILRB5O75023 590 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 EPXP11678 715 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 AGAP20933 346 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 PNLIPRP2P54317 469 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 RAB2AP61019 212 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 CXADRP78310 365 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 UBE2NLQ5JXB2 153 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 JMJD6Q6NYC1 403 aaPredicted RBP14.45□□□□□ -0.1
SYNE3-203ENST00000554873 SLC36A1Q7Z2H8 476 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 DEFB128Q7Z7B8 93 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 ADIPOR2Q86V24 386 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 OR9A1PQ8NGU1 263 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 CD99L2Q8TCZ2 262 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 C14orf144Q96I85 54 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 CMTM3Q96MX0 182 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 GGACTQ9BVM4 153 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 FNDC11Q9BVV2 318 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 WDR13Q9H1Z4 485 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 C9orf170A2RU37 121 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 IGHV2-5P01817 119 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 CTSLP07711 333 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 TMEM215Q68D42 235 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 TEX19Q8NA77 164 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 FCAMRQ8WWV6 532 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 ACOT11Q8WXI4 607 aaPredicted RBP14.45□□□□□ -0.1
SYNE3-203ENST00000554873 TRIM43Q96BQ3 446 aaPredicted RBP14.45□□□□□ -0.1
SYNE3-203ENST00000554873 SMCO4Q9NRQ5 59 aa14.45□□□□□ -0.1
SYNE3-203ENST00000554873 C17orf113A0A1B0GUU1 675 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 A0A1W2PPE3 182 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 OR6C76A6NM76 312 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 PYCARD-AS1I3L0S3 204 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 BCL2L11O43521 198 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 ACTL6AO96019 429 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 MANFP55145 182 aaKnown RBP14.44□□□□□ -0.1
SYNE3-203ENST00000554873 LSM11P83369 360 aaKnown RBP eCLIP14.44□□□□□ -0.1
SYNE3-203ENST00000554873 CSRP2Q16527 193 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 NUDT18Q6ZVK8 323 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 C6orf120Q7Z4R8 191 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 CMTM4Q8IZR5 234 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 SLC39A11Q8N1S5 342 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 C2orf73Q8N5S3 287 aaPredicted RBP14.44□□□□□ -0.1
SYNE3-203ENST00000554873 MORN4Q8NDC4 146 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 CYB5D2Q8WUJ1 264 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 GCDHQ92947 438 aaPredicted RBP14.44□□□□□ -0.1
SYNE3-203ENST00000554873 ZNF75AQ96N20 296 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 ALG8Q9BVK2 526 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 CKAP5Q14008 2032 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 DENND4CQ5VZ89 1909 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 TRAV14DV4A0A0A6YYC5 116 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 NUDT19A8MXV4 375 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 RTCAO00442 366 aaKnown RBP14.44□□□□□ -0.1
SYNE3-203ENST00000554873 PLPP2O43688 288 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 PCDH8O95206 1070 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 GKN3PP0CG01 181 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 HOXA6P31267 233 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 HTR5AP47898 357 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 FAAP20Q6NZ36 180 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 C11orf88Q6PI97 169 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 TMCO2Q7Z6W1 182 aaPredicted RBP14.44□□□□□ -0.1
SYNE3-203ENST00000554873 ACBD7Q8N6N7 88 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 PINK1Q9BXM7 581 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 C5AR2Q9P296 337 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 ASH2LQ9UBL3 628 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 KLK11Q9UBX7 282 aa14.44□□□□□ -0.1
SYNE3-203ENST00000554873 J3QRE1 110 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 FMO6PO60774 539 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 SLC34A2O95436 690 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 OR8U8P0C7N1 319 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 RCC1P18754 421 aaPredicted RBP14.43□□□□□ -0.1
SYNE3-203ENST00000554873 TBXA2RP21731 343 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 CHAF1BQ13112 559 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 ZNF345Q14585 488 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 RPL13AP3Q6NVV1 102 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 ZNF813Q6ZN06 617 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 COMTD1Q86VU5 262 aa14.43□□□□□ -0.1
SYNE3-203ENST00000554873 SIRT6Q8N6T7 355 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms