RNA–Protein interactions for RNA: ENST00000554257.1

LINC00517-202, long intergenic non-protein coding RNA 517, humanhuman

TSL 2 BASIC

Gene LINC00517, Length 3,460 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-202ENST00000554257 NRMQ8IXM6 262 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 C10orf67Q8IYJ2 551 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 TMEM178AQ8NBL3 297 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 OR4Q3Q8NH05 313 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 GIPC3Q8TF64 312 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 MIB2Q96AX9 1013 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 FAM46AQ96IP4 442 aaKnown RBP6.06□□□□□ -1.44
LINC00517-202ENST00000554257 FNDC11Q9BVV2 318 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 SLC6A15Q9H2J7 730 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 REEP1Q9H902 201 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 SLC25A19Q9HC21 320 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 PDP1Q9P0J1 537 aaPredicted RBP6.06□□□□□ -1.44
LINC00517-202ENST00000554257 NDRG4Q9ULP0 352 aaKnown RBP6.06□□□□□ -1.44
LINC00517-202ENST00000554257 GTF3C1Q12789 2109 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 MAP1BP46821 2468 aaKnown RBP6.06□□□□□ -1.44
LINC00517-202ENST00000554257 UBR5O95071 2799 aaPredicted RBP6.06□□□□□ -1.44
LINC00517-202ENST00000554257 HTR3EA5X5Y0 456 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 SAC3D1A6NKF1 404 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 A8MVM7 634 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 MKRN2OSH3BPM6 223 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 GMFGO60234 142 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 RAMP1O60894 148 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 PTNP21246 168 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 CLK1P49759 484 aaKnown RBP6.06□□□□□ -1.44
LINC00517-202ENST00000554257 RAC1P63000 192 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 MYBPHQ13203 477 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 C3orf33Q6P1S2 294 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 POMZP3Q6PJE2 187 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 RASSF6Q6ZTQ3 369 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 YRDCQ86U90 279 aaKnown RBP6.06□□□□□ -1.44
LINC00517-202ENST00000554257 ZADH2Q8N4Q0 377 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 LINC00471Q8N535 108 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 AQP11Q8NBQ7 271 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 MFSD8Q8NHS3 518 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 APH1BQ8WW43 257 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 TFAP2CQ92754 450 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 FKRPQ9H9S5 495 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 TMEM27Q9HBJ8 222 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 C8orf4Q9NR00 106 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 MRPL39Q9NYK5 338 aaKnown RBP6.06□□□□□ -1.44
LINC00517-202ENST00000554257 CLCF1Q9UBD9 225 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 ZNF229Q9UJW7 825 aa6.06□□□□□ -1.44
LINC00517-202ENST00000554257 SPTBN2O15020 2390 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 TRAV36DV7A0A075B6V5 113 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 TRIM64A6NGJ6 449 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 ENO4A6NNW6 628 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 SNAP29O95721 258 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 GP1BBP13224 206 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 HPGDP15428 266 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 POLR2IP36954 125 aaKnown RBP6.05□□□□□ -1.44
LINC00517-202ENST00000554257 AGFG1P52594 562 aaKnown RBP6.05□□□□□ -1.44
LINC00517-202ENST00000554257 PPIAP62937 165 aaKnown RBP6.05□□□□□ -1.44
LINC00517-202ENST00000554257 SYT14P1Q58G82 188 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 C1orf140Q5VVS0 124 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 RTL6Q6ICC9 239 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 CADM2Q8N3J6 435 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 C9orf43Q8TAL5 461 aaPredicted RBP6.05□□□□□ -1.44
LINC00517-202ENST00000554257 ZNF519Q8TB69 540 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 GNPDA2Q8TDQ7 276 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 STMN2Q93045 179 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 NMD3Q96D46 503 aaKnown RBP6.05□□□□□ -1.44
LINC00517-202ENST00000554257 BPIFA2Q96DR5 249 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 GPR137Q96N19 417 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 RDH12Q96NR8 316 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 BBC3Q96PG8 261 aaPredicted RBP6.05□□□□□ -1.44
LINC00517-202ENST00000554257 C9orf16Q9BUW7 83 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 MGAT4BQ9UQ53 548 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 TRAPPC4Q9Y296 219 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 NPIPB13A6NJU9 1138 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 ZNF716A6NP11 495 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 FAM166BA8MTA8 275 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 NPIPB4C9JG80 1138 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 PLPP3O14495 311 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 TXNDC12O95881 172 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 RYKP34925 604 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 GPR4P46093 362 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 ZNF41P51814 821 aaPredicted RBP6.05□□□□□ -1.44
LINC00517-202ENST00000554257 SMIM11AP58511 58 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 OC90Q02509 493 aaPredicted RBP6.05□□□□□ -1.44
LINC00517-202ENST00000554257 POU4F3Q15319 338 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 C5orf46Q6UWT4 87 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 ZIC4Q8N9L1 334 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 OR13C2Q8NGS9 318 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 DNAJC9Q8WXX5 260 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 TMEM234Q8WY98 164 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 C5orf34Q96MH7 638 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 TIMP4Q99727 224 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 RBM4BQ9BQ04 359 aaKnown RBP6.05□□□□□ -1.44
LINC00517-202ENST00000554257 PIGQQ9BRB3 760 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 RBM4Q9BWF3 364 aaKnown RBP6.05□□□□□ -1.44
LINC00517-202ENST00000554257 EGLN3Q9H6Z9 239 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 SLC6A5Q9Y345 797 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 LRRC42Q9Y546 428 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 LINC01387J3KSC0 135 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 SMAD9O15198 467 aaKnown RBP6.05□□□□□ -1.44
LINC00517-202ENST00000554257 C1QL1O75973 258 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 GDF1P27539 372 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 ZNF133P52736 654 aaPredicted RBP6.05□□□□□ -1.44
LINC00517-202ENST00000554257 HIST3H3Q16695 136 aa6.05□□□□□ -1.44
LINC00517-202ENST00000554257 TMCO5AQ8N6Q1 288 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms