RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 SLC16A1P53985 500 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 SKP2Q13309 424 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 GNA13Q14344 377 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 WHAMMP3Q1A5X7 153 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 PGS1Q32NB8 556 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 AAED1Q7RTV5 226 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 GPAT4Q86UL3 456 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 CCDC103Q8IW40 242 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 FNDC5Q8NAU1 212 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 SGMS2Q8NHU3 365 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 ZNF418Q8TF45 676 aaPredicted RBP7.12□□□□□ -1.27
ACTN1-212ENST00000554158 TWIST2Q8WVJ9 160 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 OIT3Q8WWZ8 545 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 GCDHQ92947 438 aaPredicted RBP7.12□□□□□ -1.27
ACTN1-212ENST00000554158 FCRL1Q96LA6 429 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 SLC38A2Q96QD8 506 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 SNX18Q96RF0 628 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 KATNB1Q9BVA0 655 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 CA10Q9NS85 328 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.12□□□□□ -1.27
ACTN1-212ENST00000554158 SIRT3Q9NTG7 399 aaPredicted RBP7.12□□□□□ -1.27
ACTN1-212ENST00000554158 OXSMQ9NWU1 459 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 MKLN1Q9UL63 735 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 TRAPPC4Q9Y296 219 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 WDR45Q9Y484 360 aa7.12□□□□□ -1.27
ACTN1-212ENST00000554158 TMED7-TICAM2A0A0A6YYA0 188 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 RNF103-CHMP3A0A140T963 221 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 LRP5LA4QPB2 252 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 OR6C65A6NJZ3 312 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 ZNF716A6NP11 495 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 NPIPB9F8W1W9 429 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 hCG_2039718K7EN88 272 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 ETV2O00321 342 aaPredicted RBP7.11□□□□□ -1.27
ACTN1-212ENST00000554158 KLF11O14901 512 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 TRIM13O60858 407 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 SCN2BO60939 215 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 PEX11AO75192 247 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 PROCP04070 461 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 OR4A8P0C604 315 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 PRPS1L1P21108 318 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 IDH2P48735 452 aaKnown RBP7.11□□□□□ -1.27
ACTN1-212ENST00000554158 PPOXP50336 477 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 ANXA11P50995 505 aaKnown RBP7.11□□□□□ -1.27
ACTN1-212ENST00000554158 POLR2HP52434 150 aaKnown RBP7.11□□□□□ -1.27
ACTN1-212ENST00000554158 RPS26P62854 115 aaKnown RBP7.11□□□□□ -1.27
ACTN1-212ENST00000554158 MAD2L1Q13257 205 aaPredicted RBP7.11□□□□□ -1.27
ACTN1-212ENST00000554158 ZNF141Q15928 474 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 ARHGAP11BQ3KRB8 267 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 GPAT3Q53EU6 434 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 OTUD3Q5T2D3 398 aaPredicted RBP7.11□□□□□ -1.27
ACTN1-212ENST00000554158 TMEM225Q6GV28 225 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 GLCCI1Q86VQ1 547 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 IFT20Q8IY31 132 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 TEX29Q8N6K0 151 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.11□□□□□ -1.27
ACTN1-212ENST00000554158 WDR31Q8NA23 367 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 VPS37AQ8NEZ2 397 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 OR4F15Q8NGB8 312 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 OR2T11Q8NH01 316 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 ZFAND2BQ8WV99 257 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 WDR60Q8WVS4 1066 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 XAGE5Q8WWM1 108 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 ANKRD27Q96NW4 1050 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 C1orf50Q9BV19 199 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 DUSP26Q9BV47 211 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 CCDC106Q9BWC9 280 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 TAPBPLQ9BX59 468 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 OR11A1Q9GZK7 315 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 METTL17Q9H7H0 456 aaPredicted RBP7.11□□□□□ -1.27
ACTN1-212ENST00000554158 CACYBPQ9HB71 228 aaKnown RBP7.11□□□□□ -1.27
ACTN1-212ENST00000554158 POLE3Q9NRF9 147 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 SLC7A10Q9NS82 523 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 GPATCH2Q9NW75 528 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 TMED7Q9Y3B3 224 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 GRIP1Q9Y3R0 1128 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 CCL27Q9Y4X3 112 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 FLVCR1Q9Y5Y0 555 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 KCNE3Q9Y6H6 103 aa7.11□□□□□ -1.27
ACTN1-212ENST00000554158 SH3PXD2BA1X283 911 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 SMIM23A6NLE4 172 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 B4DSR2 109 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 TRIM77I1YAP6 450 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 PIP5K1BO14986 540 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 RIPK2O43353 540 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 PLIN3O60664 434 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 UGT2B17O75795 530 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 STAMBPO95630 424 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 GPIP06744 558 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 FAM157BP0CG42 384 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 NPR2P20594 1047 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 CXCR1P25024 350 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 GTF2E2P29084 291 aaKnown RBP7.1□□□□□ -1.27
ACTN1-212ENST00000554158 CRHR1P34998 444 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 CHI3L1P36222 383 aaPredicted RBP7.1□□□□□ -1.27
ACTN1-212ENST00000554158 KHKP50053 298 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 MAP2K6P52564 334 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 CDH15P55291 814 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 CCNIQ14094 377 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 PTGR1Q14914 329 aa7.1□□□□□ -1.27
ACTN1-212ENST00000554158 EFNB3Q15768 340 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms