RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 SLC25A18Q9H1K4 315 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 MEPEQ9NQ76 525 aaPredicted RBP11.18□□□□□ -0.62
SPTB-206ENST00000553938 GPR34Q9UPC5 381 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 MAB21L2Q9Y586 359 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 C2orf16Q68DN1 1984 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 C17orf113A0A1B0GUU1 675 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 GXYLT2A0PJZ3 443 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 CDHR4A6H8M9 788 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 J3QRE1 110 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 HLA-DQB1P01920 261 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 RLN2P04090 185 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 WNT1P04628 370 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 PYCR1P32322 319 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 CASP6P55212 293 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 KIAA1024LP59773 190 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 PPP1CAP62136 330 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 PLA2G7Q13093 441 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 ALKBH1Q13686 389 aaKnown RBP11.18□□□□□ -0.62
SPTB-206ENST00000553938 KCNAB1Q14722 419 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 PLA1AQ53H76 456 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 NIPAL3Q6P499 406 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 MRGPREQ86SM8 312 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 DUSP18Q8NEJ0 188 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 TRMT10AQ8TBZ6 339 aaKnown RBP11.18□□□□□ -0.62
SPTB-206ENST00000553938 PELOQ9BRX2 385 aaKnown RBP11.18□□□□□ -0.62
SPTB-206ENST00000553938 MED18Q9BUE0 208 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 PINK1Q9BXM7 581 aa11.18□□□□□ -0.62
SPTB-206ENST00000553938 ZNF443Q9Y2A4 671 aaPredicted RBP11.18□□□□□ -0.62
SPTB-206ENST00000553938 AK6Q9Y3D8 172 aaKnown RBP11.18□□□□□ -0.62
SPTB-206ENST00000553938 GRXCR1A8MXD5 290 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 PROM1O43490 865 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 PPP1R3DO95685 299 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 IGHA1P01876 353 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 LPLP06858 475 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 ATF1P18846 271 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 SLC6A1P30531 599 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 RPS27P42677 84 aaKnown RBP11.17□□□□□ -0.62
SPTB-206ENST00000553938 RAB13P51153 203 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 DPTQ07507 201 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.17□□□□□ -0.62
SPTB-206ENST00000553938 FAM53BQ14153 422 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 COL28A1Q2UY09 1125 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 AGBL4Q5VU57 503 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 SFRP4Q6FHJ7 346 aaPredicted RBP11.17□□□□□ -0.62
SPTB-206ENST00000553938 SFXN4Q6P4A7 337 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 NLRC3Q7RTR2 1065 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 OR51Q1Q8NH59 317 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 EDARADDQ8WWZ3 215 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 ZNF845Q96IR2 970 aaPredicted RBP11.17□□□□□ -0.62
SPTB-206ENST00000553938 MED28Q9H204 178 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 SLC13A4Q9UKG4 626 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 ADAM18Q9Y3Q7 739 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 MED12Q93074 2177 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 MFSD2BA6NFX1 497 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 HRKO00198 91 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 PDCD5O14737 125 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 CTSVO60911 334 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 HTR3BO95264 441 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 CT62P0C5K7 136 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 AKIRIN2Q53H80 203 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 SLC25A30Q5SVS4 291 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 MRPL2Q5T653 305 aaKnown RBP11.17□□□□□ -0.62
SPTB-206ENST00000553938 HES5Q5TA89 166 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 MRM1Q6IN84 353 aaKnown RBP11.17□□□□□ -0.62
SPTB-206ENST00000553938 PSRC1Q6PGN9 363 aaPredicted RBP11.17□□□□□ -0.62
SPTB-206ENST00000553938 SIAH3Q8IW03 269 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 OR5W2Q8NH69 310 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 NARS2Q96I59 477 aaKnown RBP11.17□□□□□ -0.62
SPTB-206ENST00000553938 GSDMCQ9BYG8 508 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 SEMA4CQ9C0C4 833 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 PELI2Q9HAT8 420 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 MRPS18AQ9NVS2 196 aaKnown RBP11.17□□□□□ -0.62
SPTB-206ENST00000553938 CLDND1Q9NY35 253 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 DEC1Q9P2X7 70 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 ENTPD4Q9Y227 616 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 EXOSC1Q9Y3B2 195 aaKnown RBP11.17□□□□□ -0.62
SPTB-206ENST00000553938 LTBP2Q14767 1821 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 EFCAB7A8K855 629 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 C17orf51A8MQB3 221 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 PRR32B1ATL7 298 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 SIGLEC6O43699 453 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 HLA-DPB1P04440 258 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 HTR1FP30939 366 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 SELENOPP49908 381 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 NUBP1P53384 320 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 ZNF85Q03923 595 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 NTRK2Q16620 822 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 DEFB115Q30KQ5 88 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 ARHGAP15Q53QZ3 475 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 ANKRD39Q53RE8 183 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 RNLSQ5VYX0 342 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 SDR9C7Q8NEX9 313 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 OR2T33Q8NG76 320 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 ACOT11Q8WXI4 607 aaPredicted RBP11.17□□□□□ -0.62
SPTB-206ENST00000553938 SMARCD2Q92925 531 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 C10orf90Q96M02 699 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 KLHDC3Q9BQ90 382 aa11.17□□□□□ -0.62
SPTB-206ENST00000553938 RPP25Q9BUL9 199 aaKnown RBP11.17□□□□□ -0.62
SPTB-206ENST00000553938 PAPOLGQ9BWT3 736 aaKnown RBP11.17□□□□□ -0.62
SPTB-206ENST00000553938 FGF22Q9HCT0 170 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms