RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 GARNL3Q5VVW2 1013 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 VN1R4Q7Z5H5 301 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 ADGRD2Q7Z7M1 963 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 LUZP2Q86TE4 346 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 SHISA5Q8N114 240 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 OR2L13Q8N349 312 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 SLC44A3Q8N4M1 653 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 PLPP7Q8NBV4 271 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 OR51A7Q8NH64 312 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 HGDQ93099 445 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 MARVELD3Q96A59 401 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 TRIM43Q96BQ3 446 aaPredicted RBP9.5□□□□□ -0.89
ERBB3-214ENST00000550070 BPIFA2Q96DR5 249 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 RAB11FIP5Q9BXF6 653 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 TMEM168Q9H0V1 697 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 CACYBPQ9HB71 228 aaKnown RBP9.5□□□□□ -0.89
ERBB3-214ENST00000550070 DLL4Q9NR61 685 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 TMEM74BQ9NUR3 256 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 SERGEFQ9UGK8 458 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 CYB5R1Q9UHQ9 305 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 ST6GALNAC2Q9UJ37 374 aa9.5□□□□□ -0.89
ERBB3-214ENST00000550070 MEIKINA0A087WXM9 373 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 HPXP02790 462 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 THBS1P07996 1170 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 SULT1A3P0DMM9 295 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 SULT1A4P0DMN0 295 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 EPXP11678 715 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 ZNF250P15622 560 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 UBE2IP63279 158 aaKnown RBP9.49□□□□□ -0.89
ERBB3-214ENST00000550070 SIM1P81133 766 aaPredicted RBP9.49□□□□□ -0.89
ERBB3-214ENST00000550070 IKZF1Q13422 519 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 SQSTM1Q13501 440 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 COL28A1Q2UY09 1125 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 EIPR1Q53HC9 387 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 IZUMO1Q8IYV9 350 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 ARL14Q8N4G2 192 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 HDDC3Q8N4P3 179 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 SPPL3Q8TCT6 385 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 CCDC120Q96HB5 630 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 ZNF350Q9GZX5 532 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 CDCP1Q9H5V8 836 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 CCDC86Q9H6F5 360 aaKnown RBP9.49□□□□□ -0.89
ERBB3-214ENST00000550070 MEPEQ9NQ76 525 aaPredicted RBP9.49□□□□□ -0.89
ERBB3-214ENST00000550070 TRIOO75962 3097 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.49□□□□□ -0.89
ERBB3-214ENST00000550070 TRABD2BA6NFA1 517 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 ZNF593O00488 134 aaPredicted RBP9.49□□□□□ -0.89
ERBB3-214ENST00000550070 RBBP9O75884 186 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 PPP1R3DO95685 299 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 CEACAM5P06731 702 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 CLTBP09497 229 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 SAGP10523 405 aaPredicted RBP9.49□□□□□ -0.89
ERBB3-214ENST00000550070 DRD5P21918 477 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 RPS4Y1P22090 263 aaKnown RBP9.49□□□□□ -0.89
ERBB3-214ENST00000550070 CMPK1P30085 196 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 ZP1P60852 638 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 ID2Q02363 134 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 EXOSC2Q13868 293 aaKnown RBP9.49□□□□□ -0.89
ERBB3-214ENST00000550070 KLF9Q13886 244 aaPredicted RBP9.49□□□□□ -0.89
ERBB3-214ENST00000550070 TP53I3Q53FA7 332 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 TMPRSS11FQ6ZWK6 438 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 ZNF707Q96C28 371 aaPredicted RBP9.49□□□□□ -0.89
ERBB3-214ENST00000550070 AUNIPQ9H7T9 357 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 BRD7Q9NPI1 651 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 EVA1BQ9NVM1 165 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 PTTG3PQ9NZH4 202 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 KCMF1Q9P0J7 381 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 USP36Q9P275 1121 aaKnown RBP9.49□□□□□ -0.89
ERBB3-214ENST00000550070 COPZ2Q9P299 210 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 SLC35A3Q9Y2D2 325 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 RNF215Q9Y6U7 377 aa9.49□□□□□ -0.89
ERBB3-214ENST00000550070 TRAV1-2A0A0B4J238 106 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 RPS10-NUDT3A0A1W2PQS6 291 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 PMS2P1A4D2B8 440 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 LRRN3E7EW58 273 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 GATCO43716 136 aaKnown RBP9.48□□□□□ -0.89
ERBB3-214ENST00000550070 PTP4A3O75365 173 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 ACAA1P09110 424 aaPredicted RBP9.48□□□□□ -0.89
ERBB3-214ENST00000550070 DNASE1P24855 282 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 BMP8BP34820 402 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 WASP42768 502 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 SOX9P48436 509 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 ZNF81P51508 661 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 PITPNAQ00169 270 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 TNFRSF17Q02223 184 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 PLAURQ03405 335 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 SNTB2Q13425 540 aaKnown RBP9.48□□□□□ -0.89
ERBB3-214ENST00000550070 RUNX2Q13950 521 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 DCST2Q5T1A1 773 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 GPR139Q6DWJ6 353 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 BMP8AQ7Z5Y6 402 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 SPRED2Q7Z698 418 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 MS4A15Q8N5U1 240 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 GALNT11Q8NCW6 608 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 OR4K14Q8NGD5 310 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 ADAD1Q96M93 576 aaKnown RBP9.48□□□□□ -0.89
ERBB3-214ENST00000550070 TIMM29Q9BSF4 260 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 LRRN3Q9H3W5 708 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 ZCCHC4Q9H5U6 513 aa9.48□□□□□ -0.89
ERBB3-214ENST00000550070 ADAP2Q9NPF8 381 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms