RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 DNPH1O43598 174 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 AHSA1O95433 338 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 PTNP21246 168 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 RRM2P31350 389 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 SMIM11AP58511 58 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 SPIBQ01892 262 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 C1orf185Q5T7R7 199 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 OR2T5Q6IEZ7 315 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 OR2T29Q8NH02 315 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 ACOT11Q8WXI4 607 aaPredicted RBP18.9■□□□□ 0.62
CACNB3-210ENST00000548874 EPYCQ99645 322 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 YY1AP1Q9H869 796 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 MEPEQ9NQ76 525 aaPredicted RBP18.9■□□□□ 0.62
CACNB3-210ENST00000548874 ZNF175Q9Y473 711 aa18.9■□□□□ 0.62
CACNB3-210ENST00000548874 MPDZO75970 2070 aa18.89■□□□□ 0.62
CACNB3-210ENST00000548874 A0A087WUU8 490 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 CD8B2A6NJW9 211 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 KDM4EB2RXH2 506 aaPredicted RBP18.89■□□□□ 0.61
CACNB3-210ENST00000548874 RRP9O43818 475 aaKnown RBP18.89■□□□□ 0.61
CACNB3-210ENST00000548874 KRT36O76013 467 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 GADD45GO95257 159 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 IGF2P01344 180 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 RPS5P46782 204 aaKnown RBP18.89■□□□□ 0.61
CACNB3-210ENST00000548874 LIMS1P48059 325 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 HMGA2P52926 109 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 CASP6P55212 293 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 CSNK2A1P68400 391 aaPredicted RBP18.89■□□□□ 0.61
CACNB3-210ENST00000548874 SGCBQ16585 318 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 ZNF239Q16600 458 aaKnown RBP18.89■□□□□ 0.61
CACNB3-210ENST00000548874 FAM69AQ5T7M9 428 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 NSUN5P2Q63ZY6 315 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 CHMP1BQ7LBR1 199 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 MFSD8Q8NHS3 518 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 TAAR8Q969N4 342 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 CPNE4Q96A23 557 aaPredicted RBP18.89■□□□□ 0.61
CACNB3-210ENST00000548874 DNAJA3Q96EY1 480 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 CALHM2Q9HA72 323 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 TIGARQ9NQ88 270 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 AP4S1Q9Y587 144 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 LYVE1Q9Y5Y7 322 aa18.89■□□□□ 0.61
CACNB3-210ENST00000548874 RP1L1Q8IWN7 2480 aaPredicted RBP18.88■□□□□ 0.61
CACNB3-210ENST00000548874 TRGV8A0A0C4DH27 118 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 TRBV4-1A0A0J9YWV2 114 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 OR2T1O43869 369 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 CST1P01037 141 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 BGLAPP02818 100 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 AGFG1P52594 562 aaKnown RBP18.88■□□□□ 0.61
CACNB3-210ENST00000548874 LSM11P83369 360 aaKnown RBP eCLIP18.88■□□□□ 0.61
CACNB3-210ENST00000548874 LTBQ06643 244 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 FOXD4Q12950 439 aaPredicted RBP18.88■□□□□ 0.61
CACNB3-210ENST00000548874 PON3Q15166 354 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 EIF2S3LQ2VIR3 472 aaKnown RBP18.88■□□□□ 0.61
CACNB3-210ENST00000548874 FGD3Q5JSP0 725 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 PODNL1Q6PEZ8 512 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 RPTNQ6XPR3 784 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 C3P1Q6ZMU1 363 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 SEM1Q6ZVN7 128 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 RNF113BQ8IZP6 322 aaKnown RBP18.88■□□□□ 0.61
CACNB3-210ENST00000548874 RPRMLQ8N4K4 120 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 OR4C15Q8NGM1 316 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 OR52J3Q8NH60 311 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 PFN4Q8NHR9 129 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 TRIB1Q96RU8 372 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 VNN3Q9NY84 501 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 MED31Q9Y3C7 131 aa18.88■□□□□ 0.61
CACNB3-210ENST00000548874 HTR3EA5X5Y0 456 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 E9PLN8 166 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 KPNA4O00629 521 aaPredicted RBP18.87■□□□□ 0.61
CACNB3-210ENST00000548874 ENTPD5O75356 428 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 FPR1P21462 350 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 OR2B6P58173 313 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 SLC35A1P78382 337 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 H3F3AP84243 136 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 SEC23BQ15437 767 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 OR7A5Q15622 319 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 PLXDC2Q6UX71 529 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 B3GNT6Q6ZMB0 384 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 ZNF730Q6ZMV8 503 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 MBOAT2Q6ZWT7 520 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 C10orf67Q8IYJ2 551 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 FNDC9Q8TBE3 224 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 WNT2BQ93097 391 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 DMRTA2Q96SC8 542 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 VKORC1Q9BQB6 163 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 TAPBPLQ9BX59 468 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 KLHL4Q9C0H6 718 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 C20orf141Q9NUB4 165 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 SH3BGRL2Q9UJC5 107 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 MCTS1Q9ULC4 181 aaKnown RBP18.87■□□□□ 0.61
CACNB3-210ENST00000548874 MEMO1Q9Y316 297 aa18.87■□□□□ 0.61
CACNB3-210ENST00000548874 SH3PXD2BA1X283 911 aa18.86■□□□□ 0.61
CACNB3-210ENST00000548874 MBD3L4A6NDZ8 208 aaPredicted RBP18.86■□□□□ 0.61
CACNB3-210ENST00000548874 MBD3L3A6NE82 208 aaPredicted RBP18.86■□□□□ 0.61
CACNB3-210ENST00000548874 MBD3L5A6NJ08 208 aaPredicted RBP18.86■□□□□ 0.61
CACNB3-210ENST00000548874 SLC22A20A6NK97 555 aa18.86■□□□□ 0.61
CACNB3-210ENST00000548874 ENO4A6NNW6 628 aa18.86■□□□□ 0.61
CACNB3-210ENST00000548874 SMAD9O15198 467 aaKnown RBP18.86■□□□□ 0.61
CACNB3-210ENST00000548874 PIP5K1CO60331 668 aa18.86■□□□□ 0.61
CACNB3-210ENST00000548874 TIPRLO75663 272 aa18.86■□□□□ 0.61
CACNB3-210ENST00000548874 SYNGR4O95473 234 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms