RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 DEFA6Q01524 100 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 HGFACQ04756 655 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 SCGB2A2Q13296 93 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 ADRM1Q16186 407 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 TBRG1Q3YBR2 411 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 AWAT1Q58HT5 328 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 LIPMQ5VYY2 423 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 SHQ1Q6PI26 577 aaKnown RBP11.03□□□□□ -0.64
SCAF11-208ENST00000546534 ZYG11AQ6WRX3 759 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 USP43Q70EL4 1123 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 EIF3MQ7L2H7 374 aaKnown RBP11.03□□□□□ -0.64
SCAF11-208ENST00000546534 ZIC4Q8N9L1 334 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 OR5AK3PQ8NH89 298 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 ZNF563Q8TA94 476 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 OR5P2Q8WZ92 322 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 TMEM186Q96B77 213 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 CCDC126Q96EE4 140 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 SEC61A2Q9H9S3 476 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 LPAR2Q9HBW0 351 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 TMEM45AQ9NWC5 275 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 FBXO9Q9UK97 447 aaPredicted RBP11.03□□□□□ -0.64
SCAF11-208ENST00000546534 MKLN1Q9UL63 735 aa11.03□□□□□ -0.64
SCAF11-208ENST00000546534 A0A087WUV0 522 aaPredicted RBP11.02□□□□□ -0.65
SCAF11-208ENST00000546534 EXOC1LA0A1B0GW35 172 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 SCAMP2O15127 329 aaKnown RBP11.02□□□□□ -0.65
SCAF11-208ENST00000546534 EIF1BO60739 113 aaKnown RBP11.02□□□□□ -0.65
SCAF11-208ENST00000546534 LINC00032P0C843 101 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 MYL2P10916 166 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 IMPDH2P12268 514 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 NPR2P20594 1047 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 FKBP2P26885 142 aaKnown RBP11.02□□□□□ -0.65
SCAF11-208ENST00000546534 THBS4P35443 961 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 PGM1P36871 562 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 HPCAL1P37235 193 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 NAA20P61599 178 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 RPS26P62854 115 aaKnown RBP11.02□□□□□ -0.65
SCAF11-208ENST00000546534 TUBA1BP68363 451 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 TUBA4AP68366 448 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 IL1RL1Q01638 556 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 MAPK14Q16539 360 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 GALNTL6Q49A17 601 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 CFAP157Q5JU67 520 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 TUBA1AQ71U36 451 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 GRINAQ7Z429 371 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 SPATA21Q7Z572 469 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 POMGNT2Q8NAT1 580 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 FAM71CQ8NEG0 241 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 NUP37Q8NFH4 326 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 OR4F15Q8NGB8 312 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 OR1K1Q8NGR3 316 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 CLDND2Q8NHS1 167 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 TMEM45BQ96B21 275 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 AURKBQ96GD4 344 aaPredicted RBP11.02□□□□□ -0.65
SCAF11-208ENST00000546534 ZNF385AQ96PM9 386 aaKnown RBP11.02□□□□□ -0.65
SCAF11-208ENST00000546534 NAA11Q9BSU3 229 aaPredicted RBP11.02□□□□□ -0.65
SCAF11-208ENST00000546534 TUBB1Q9H4B7 451 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 SERHL2Q9H4I8 314 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 ZNF442Q9H7R0 627 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 ZNF696Q9H7X3 374 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 DYNLRB1Q9NP97 96 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 CRNNQ9UBG3 495 aaPredicted RBP11.02□□□□□ -0.65
SCAF11-208ENST00000546534 ZNF232Q9UNY5 417 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 FIS1Q9Y3D6 152 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 GRIP1Q9Y3R0 1128 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 PCDHGB1Q9Y5G3 927 aa11.02□□□□□ -0.65
SCAF11-208ENST00000546534 PKD1L1Q8TDX9 2849 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 ARPC4-TTLL3A0A0A6YYG9 625 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 NR5A2O00482 541 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 LSM1O15116 133 aaKnown RBP11.01□□□□□ -0.65
SCAF11-208ENST00000546534 STX11O75558 287 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 LGI1O95970 557 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 IGLV1-44P01699 117 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 MSMBP08118 114 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 ADRA2AP08913 450 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 NEFHP12036 1026 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 EPHA1P21709 976 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 UBE2NP61088 152 aaKnown RBP11.01□□□□□ -0.65
SCAF11-208ENST00000546534 SLC35A1P78382 337 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 C8orf74Q6P047 294 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 C1orf229Q6ZS94 237 aaPredicted RBP11.01□□□□□ -0.65
SCAF11-208ENST00000546534 AAED1Q7RTV5 226 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 CARM1Q86X55 608 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 CDK20Q8IZL9 346 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 SFXN5Q8TD22 340 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 CKAP2Q8WWK9 683 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 BCL2L2Q92843 193 aaPredicted RBP11.01□□□□□ -0.65
SCAF11-208ENST00000546534 MOAP1Q96BY2 351 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 LRRC37BQ96QE4 947 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 ZNF350Q9GZX5 532 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 TSPYL1Q9H0U9 437 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 NARFLQ9H6Q4 476 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 USP22Q9UPT9 525 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 TMED5Q9Y3A6 229 aa11.01□□□□□ -0.65
SCAF11-208ENST00000546534 TMED7-TICAM2A0A0A6YYA0 188 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 VSTM5A8MXK1 200 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 AZIN1O14977 448 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 KRT33AO76009 404 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 MATN1P21941 496 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 PAX7P23759 505 aa11□□□□□ -0.65
SCAF11-208ENST00000546534 LIMS1P48059 325 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms