RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 GBX2P52951 348 aaPredicted RBP14.51□□□□□ -0.09
LDLR-204ENST00000545707 PER3P56645 1201 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 ACTC1P68032 377 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 ACTA1P68133 377 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 C19orf57Q0VDD7 668 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 ZBTB37Q5TC79 503 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 ARHGAP11AQ6P4F7 1023 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 OR8H3Q8N146 312 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 FAM109AQ8N4B1 249 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 CSNK1A1LQ8N752 337 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 HMGB4Q8WW32 186 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 CTHRC1Q96CG8 243 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 RASD2Q96D21 266 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 SPACA7Q96KW9 195 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 CNN2Q99439 309 aaKnown RBP14.51□□□□□ -0.09
LDLR-204ENST00000545707 C2orf42Q9NWW7 574 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 SPACA6W5XKT8 324 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 TRAV1-2A0A0B4J238 106 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 PIN1P1O15428 100 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 NKX2-2O95096 273 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 KLF8O95600 359 aaPredicted RBP14.51□□□□□ -0.09
LDLR-204ENST00000545707 CELA2BP08218 269 aaPredicted RBP14.51□□□□□ -0.09
LDLR-204ENST00000545707 ANXA3P12429 323 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 SIPA1Q96FS4 1042 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 GFI1Q99684 422 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 ZNF426Q9BUY5 554 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 TRAF4Q9BUZ4 470 aaPredicted RBP14.51□□□□□ -0.09
LDLR-204ENST00000545707 FAM60AQ9NP50 221 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 ANKRD10Q9NXR5 420 aa14.51□□□□□ -0.09
LDLR-204ENST00000545707 DOCK8Q8NF50 2099 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 OR6C68A6NDL8 312 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 PRR32B1ATL7 298 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 H3BSH0 61 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 ZNF593O00488 134 aaPredicted RBP14.5□□□□□ -0.09
LDLR-204ENST00000545707 SSNA1O43805 119 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 TYRP1P17643 537 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 GDNFP39905 211 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 ERVK-25P63136 954 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 ALG11Q2TAA5 492 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 TEX261Q6UWH6 196 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 LINGO2Q7L985 606 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 TEX19Q8NA77 164 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 PHOSPHO2Q8TCD6 241 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 GPR137Q96N19 417 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 EMC7Q9NPA0 242 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 NCDNQ9UBB6 729 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 SERTAD3Q9UJW9 196 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 PCOLCE2Q9UKZ9 415 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 U3KQ87 197 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 TGFBR3LH3BV60 316 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 GPR171O14626 319 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 NDUFB2O95178 105 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 UCHL1P09936 223 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 OR2T7P0C7T2 308 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 S1PR1P21453 382 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 ENPP1P22413 925 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 PGDP52209 483 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 KLF9Q13886 244 aaPredicted RBP14.5□□□□□ -0.09
LDLR-204ENST00000545707 HSD17B12Q53GQ0 312 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 ZNF680Q8NEM1 530 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 OR2T27Q8NH04 317 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 BAHD1Q8TBE0 780 aaPredicted RBP14.5□□□□□ -0.09
LDLR-204ENST00000545707 SLC2A12Q8TD20 617 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 ADAMTS14Q8WXS8 1223 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 HSPA12BQ96MM6 686 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 TSSK2Q96PF2 358 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 GAS2L1Q99501 681 aaPredicted RBP14.5□□□□□ -0.09
LDLR-204ENST00000545707 DPCDQ9BVM2 203 aaPredicted RBP14.5□□□□□ -0.09
LDLR-204ENST00000545707 FKRPQ9H9S5 495 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 C14orf105Q9NVL8 296 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 ABRACLQ9P1F3 81 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 LRIT1Q9P2V4 623 aa14.5□□□□□ -0.09
LDLR-204ENST00000545707 ARL6IP5O75915 188 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 CRYZL1O95825 349 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 SERPINA3P01011 423 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 KIAA1024LP59773 190 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 NANOS3P60323 173 aaKnown RBP14.49□□□□□ -0.09
LDLR-204ENST00000545707 POU4F2Q12837 409 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 FGFBP1Q14512 234 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 PON3Q15166 354 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 CD276Q5ZPR3 534 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 ZCCHC12Q6PEW1 402 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 KIAA1324Q6UXG2 1013 aaKnown RBP14.49□□□□□ -0.09
LDLR-204ENST00000545707 PIAS4Q8N2W9 510 aaPredicted RBP14.49□□□□□ -0.09
LDLR-204ENST00000545707 GATSQ8NAP1 163 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 ZNF527Q8NB42 609 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 RCBTB1Q8NDN9 531 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 OR4C3Q8NH37 302 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 OR2M2Q96R28 347 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 RANBP3Q9H6Z4 567 aaPredicted RBP14.49□□□□□ -0.09
LDLR-204ENST00000545707 HCN3Q9P1Z3 774 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 SPATA2Q9UM82 520 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 ICAM5Q9UMF0 924 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 CAMK2AQ9UQM7 478 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 RCE1Q9Y256 329 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 PCDHGA9Q9Y5G4 932 aaKnown RBP14.49□□□□□ -0.09
LDLR-204ENST00000545707 ENTPD2Q9Y5L3 495 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 ICMTO60725 284 aa14.49□□□□□ -0.09
LDLR-204ENST00000545707 RPP14O95059 124 aaKnown RBP14.49□□□□□ -0.09
LDLR-204ENST00000545707 EGFP01133 1207 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms